Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01203 ATGCGTTTTTTTCTGTTCATTGAGGCTGGTTTACTTAACGTGAGGTATAAGACTTGGATGTTCACTTGGCATACTGTGTGTTGTTTAGCTGGGCTATATAGTGAGCCAAATGGCTCAAGATGTGGTTGTTTGGTCGAAAGAGATTGGTTAATGAATATCGATGGAAAGAGGCCGTTGGACCTTGGAAGGAGAGACCAGGGCACTTTGGTGATGTATGGAAGTACTGGACTCATGATGGACTTGGCTATTTTGAGTTTCTTCAAATACGACGCAAGCACCGTGTTGAAGTTGTTGCAAGAAATAGCGAATCATGCACATTGGAAAATTAATTGGAACGAGTTGGATGATGATAGTGACTTGGAATGTGAACGGGAAACTTTACCAGCCATACCCCAGCAAACTGCATTGCAAGCTTCAGCATGTGTGGAGGCAATGATTGCATCTGTATCAATGAGCCAATCTACACCAACTAGCTTAACAATTGAAGCTCCTTTAACTATAAATGTTCCAACACATGCTTCATTTAGTACAACTTATTCACAACCTTATTATATACAAGAGAAAAACATTAATTTTCCAGTTATTGTTGAGAGACAACCAAGGTCAAACATCATCAATGTACCTTCAACAACAAAAGATTTACAAGAAAATGAATTAGTTAATCACAACACACCAATTCAAAAGAAAAGAAAAATATGGTCAGAGGAAGAGGATATGCAACTACAAGCTGCTGTTCAGAAATGGGGTGAAGGGAATTGGGCCCAGATAGCTGGAAGAGATGATTTTCCTGTTGATAGAAATGCTGCACAATTGTCTAAGAGATGGAGAATCTTAAGAAATAAAGCTGGAAACACTAATTGA 861 0.3879 MRFFLFIEAGLLNVRYKTWMFTWHTVCCLAGLYSEPNGSRCGCLVERDWLMNIDGKRPLDLGRRDQGTLVMYGSTGLMMDLAILSFFKYDASTVLKLLQEIANHAHWKINWNELDDDSDLECERETLPAIPQQTALQASACVEAMIASVSMSQSTPTSLTIEAPLTINVPTHASFSTTYSQPYYIQEKNINFPVIVERQPRSNIINVPSTTKDLQENELVNHNTPIQKKRKIWSEEEDMQLQAAVQKWGEGNWAQIAGRDDFPVDRNAAQLSKRWRILRNKAGNTN 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01203 286 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 88 114 - -
Car02g01203 286 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 114 286 - -
Car02g01203 286 ProSiteProfiles Myb-like domain profile. 225 279 IPR001005 -
Car02g01203 286 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 88 114 - -
Car02g01203 286 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 114 286 - -
Car02g01203 286 CDD SANT_TRF 233 280 - -
Car02g01203 286 Gene3D - 224 284 - -
Car02g01203 286 SMART sant 229 281 IPR001005 -
Car02g01203 286 Pfam Myb-like DNA-binding domain 232 276 IPR001005 -
Car02g01203 286 SUPERFAMILY Homeodomain-like 227 279 IPR009057 -
Car02g01203 286 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 224 283 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01203 Car-Chr2 36401300 36407724 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Car02g01203 Myb_DNA-binding 7.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01203 - - cam:101491410 386.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01203 02 36401300 36407724 Car05g02686 05 71952046 71959179 PCT