Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01197 ATGCTGAACCCAACAAGAGCAGAAGCAGAACGGTTACTAGGAATCTCAGAAAAGCTTTTACAAAACAGAGATCTAATGGGTTCAAAAGAATTCGCAATTTTAGCACAAGAAACCGAACCCCTTCTAGAAGGTTCCGACCAGATCTTAGCAATCGTCGACGTCCTAATCGCTTCCGAAAAGCGTGTCAACAATAATCCCGATTGGTACTCCATTCTCCAAATCGATCGACGCTCCGACGACCTCGACCTCATCAAAAAACAATACCGCCGTCTCGCTCTCCTCCTCCACCCCGACAAAAGCCGATTTCAGTTCGCCGATCATGCTTTCAAGCTCGTCGCCGATGCTTGGGCTGTTCTCTCCGATCCAATTAAGAAATCTCACTACGACAAAGACCTATCGTTTTTCGCTCGTGTTGATTTATCTGTTCCCGGTTGGGTTCAGCAAGATAAATTACCGGTTCGGAGGACCGGGCCTGTGTCTGGACCCGGACCCGGTCCGAGAAACAGTGCTGCATCTGCTAGAGATGAGATTTCGGCAGATGAAAGCGCGCGCAGGAGGACCGCGACTTTTTGGACAGCGTGTCCTTACTGTTACCGTTTGTATGAGTATCCTAAGGTATATGAGGGTTTCTGTTTGAAATGCCCTAATTGTGAAAGATCCTTTCACGGTGTTAATGTTCCGTCGTTACCGCCGTTAGTTCCAGGACAAGAGGCTTATTATTGTTGCTGGGGTTTTTTTCCTATGGGGTTTGTGCTTGGTAACTCAGATGACAAAGAGCCTGAGCCGGTGGTGGTTGAACCTGTTTCTGAACCAGTTCCAGTCTCGGTTCAGCCTCCTTCTTCGCTTCCGAATTGGATGCCTGCACCAGTACCGGTCGAGAATGGTAGAAATAATGTAATGCCGGTAGTGCCCGTTACGACGCCGGCAAGGGTGGCAACTAGGTCCGGTGTTGTTTCGAATGGTGTTGGCCCGGGAACGGGTCCGAGGAAGCGTGGAAGGCCAAGGAAGTATTATTAA 1017 0.4926 MLNPTRAEAERLLGISEKLLQNRDLMGSKEFAILAQETEPLLEGSDQILAIVDVLIASEKRVNNNPDWYSILQIDRRSDDLDLIKKQYRRLALLLHPDKSRFQFADHAFKLVADAWAVLSDPIKKSHYDKDLSFFARVDLSVPGWVQQDKLPVRRTGPVSGPGPGPRNSAASARDEISADESARRRTATFWTACPYCYRLYEYPKVYEGFCLKCPNCERSFHGVNVPSLPPLVPGQEAYYCCWGFFPMGFVLGNSDDKEPEPVVVEPVSEPVPVSVQPPSSLPNWMPAPVPVENGRNNVMPVVPVTTPARVATRSGVVSNGVGPGTGPRKRGRPRKYY 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01197 338 MobiDBLite consensus disorder prediction 311 338 - -
Car02g01197 338 MobiDBLite consensus disorder prediction 152 180 - -
Car02g01197 338 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 336 - -
Car02g01197 338 PRINTS DnaJ domain signature 69 87 IPR001623 -
Car02g01197 338 PRINTS DnaJ domain signature 88 103 IPR001623 -
Car02g01197 338 PRINTS DnaJ domain signature 104 124 IPR001623 -
Car02g01197 338 SUPERFAMILY Chaperone J-domain 61 132 IPR036869 -
Car02g01197 338 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Car02g01197 338 Gene3D DnaJ domain 55 138 IPR036869 -
Car02g01197 338 Pfam DnaJ domain 67 129 IPR001623 -
Car02g01197 338 CDD DnaJ 67 121 IPR001623 -
Car02g01197 338 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 336 - -
Car02g01197 338 SMART dnaj_3 66 124 IPR001623 -
Car02g01197 338 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01197 Car-Chr2 36248682 36251359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01197 3 335 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 48.415 1.75e-102 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01197 - - gmx:100816918 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01197 02 36248682 36251359 Car02g01197 02 36248682 36251359 ECH
Car02g01197 02 36248682 36251359 Car05g02694 05 72028715 72029867 PCT