Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01193 ATGTTCTCAAACTTTCAACATAACAACCTTTTTCAACCTTCTCGTGAATGCCAAACCTCTGAAGATGATGATGCCCGAAGCAGCGGTGGGCCCAATCCAATAACTACCCAAAATCCTTTTTCCGGAAGAAGCGCCGCTAGTGACGGGGCTTCTATTGAAATTGGACGCAGGCCCAGAGGCCGTCCACCTGGATCCAAAAACAAACCCAAATCCCCACTCATAATTACTAACGACCCCGAGCCCGCGATGAGCCCACACATTCTAGAAATCCCTGGAGGAAGCGATCTTGTCGAGTCAATAGCCCGGTTCAGTAACCGAAGAAATACCGGTTTATGTGTATTAACCGGTTCAGGAACAGTCGTTAACGTTACCCTCCGTCAACCTTCAGCACCTCTCGGCACCACCGTTACTTTTACCGGCCGTTTCAATATCCTCACCATATCCGCCACCTTCTTCCCGTCATCGGAATCCTCGCCGCCGATGCCTAAAGAATTTTCCATCTCCCTCGCCGGACCTCAGGGTCAGATCATCGGAGGATTCGTCGTTGGGCGGTTGGTCGCCGCCGGTACGGTGTTTGTAATAGCTGCTTCGTTTAACAATCCGTCTTATCATAGGCTGCCTTTGGAAGAAGACGTGCGGAGTAAGTCGGTCTCTGGTGGTGATGGACAGTCGCCGTCGCTCTCCGGTGGGGAGTCGTGTATGTATAGCTGTCAGCTTCCTTCGGATGTGATTTGGGCTCCAACGGCAAGAACACCTTTCTGA 762 0.5157 MFSNFQHNNLFQPSRECQTSEDDDARSSGGPNPITTQNPFSGRSAASDGASIEIGRRPRGRPPGSKNKPKSPLIITNDPEPAMSPHILEIPGGSDLVESIARFSNRRNTGLCVLTGSGTVVNVTLRQPSAPLGTTVTFTGRFNILTISATFFPSSESSPPMPKEFSISLAGPQGQIIGGFVVGRLVAAGTVFVIAASFNNPSYHRLPLEEDVRSKSVSGGDGQSPSLSGGESCMYSCQLPSDVIWAPTARTPF 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01193 253 CDD DUF296 85 198 IPR005175 -
Car02g01193 253 SUPERFAMILY AF0104/ALDC/Ptd012-like 82 210 - -
Car02g01193 253 Pfam Plants and Prokaryotes Conserved (PCC) domain 85 200 IPR005175 -
Car02g01193 253 MobiDBLite consensus disorder prediction 24 45 - -
Car02g01193 253 PIRSF ESCAROLA 3 241 IPR014476 GO:0003680
Car02g01193 253 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 8 251 - -
Car02g01193 253 MobiDBLite consensus disorder prediction 1 16 - -
Car02g01193 253 ProSiteProfiles PPC domain profile profile. 80 220 IPR005175 -
Car02g01193 253 MobiDBLite consensus disorder prediction 1 81 - -
Car02g01193 253 Gene3D - 84 216 - -
Car02g01193 253 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 8 251 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01193 Car-Chr2 36109237 36110313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01193 48 252 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 59.735 5.41e-86 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01193 - - cam:101500910 479.174