Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01183 ATGGCACCAAGTTTTGATTGTTTTGCAAACCTTCTCTGTACTGAAGACATCAGCATTTTTGAGGAAAATGAATTTGGGGATTCATTGGAGATGTTGGAGGAACCATGGAATGTTGAATATGAACCAAACCTTAATCAAACTCAGGAATTTGATGACCCAATTGGGTTGTTACCATTGCTGAGTGATGAAAGTTTGAAGGTTATGATTGAAAAGGAATGCCATCACTTACCTGCTAGTGATTATGTCAATAGGCTCAAAATTGGGGTTTTGGATTTGGAGGGTAGAATGGATGCCATTGATTGGATTCAAAAGGTTCGAGTGCATTTCGGTTTCGGACCTCTCTGTGTTTACCTAGCTGTTAACTACATGGATCGATTCCTTTCCGCATGTGAAACACTTAAGGAAAGACTTTGGTCAATCCAACTGTTGGCTGTGGGCTGTGTTTATCTGGCAGCTAAAATTGAAGAGACTACAGTTCCTCCATCTCTTGATTTGCAGGTCAATGAAACTAAGTATTTGTTTGATACTAAAACAATACTGAGGATGGAGCTTATGGTAATGAGCACATTGAAATGGAGAATGCAAGCAATTACACCTTTCTCCTTCATTGACTATTTCCTTTACAAGGTCAATAATGATCAAGTTCCAACAGGAGATTCAATTTTGCAATCAATCCAGCTCATACTGAGTACTATAAGAGGAATTGACTTCATTCAGTTCAGACCATCTGAAATTGCAGCAGCTGTTGCAGTGTTAGTATCTATGGTGGGGGAAAACCAAACAGTTGAAACTGAGAAAGCAGTTTCTCTTCTGATTCAGTATGTTGAAAAGGAGAGAGTAATGAAGTGTGTTGAAATGATTCAACAGCTGTCATCAGGTAGTGATTCTGAAACAAAAGAAACTACAACTTCTGCTTCTGTTTCTGTCCCTTGTGTTCCTCAAAGTCCAATAGGTGTATTGGAACCTCTATGTCTCAGCTACAAAAGTGATGAAAACAACACTAATGTTGCTACTTCACCACATGCAAATCCTTCACTTCATAATGATATTAGTCCTGATCCTAAACGCAAGAAGCTTAACACAACCATTGAAGATTGA 1098 0.3862 MAPSFDCFANLLCTEDISIFEENEFGDSLEMLEEPWNVEYEPNLNQTQEFDDPIGLLPLLSDESLKVMIEKECHHLPASDYVNRLKIGVLDLEGRMDAIDWIQKVRVHFGFGPLCVYLAVNYMDRFLSACETLKERLWSIQLLAVGCVYLAAKIEETTVPPSLDLQVNETKYLFDTKTILRMELMVMSTLKWRMQAITPFSFIDYFLYKVNNDQVPTGDSILQSIQLILSTIRGIDFIQFRPSEIAAAVAVLVSMVGENQTVETEKAVSLLIQYVEKERVMKCVEMIQQLSSGSDSETKETTTSASVSVPCVPQSPIGVLEPLCLSYKSDENNTNVATSPHANPSLHNDISPDPKRKKLNTTIED 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01183 365 Pfam Cyclin, N-terminal domain 65 194 IPR006671 -
Car02g01183 365 SUPERFAMILY Cyclin-like 55 194 IPR036915 -
Car02g01183 365 PANTHER CYCLINS 1 345 IPR039361 -
Car02g01183 365 CDD CYCLIN 94 187 IPR013763 -
Car02g01183 365 ProSitePatterns Cyclins signature. 95 126 IPR006671 -
Car02g01183 365 Gene3D - 78 195 - -
Car02g01183 365 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 345 - -
Car02g01183 365 SUPERFAMILY Cyclin-like 178 290 IPR036915 -
Car02g01183 365 Gene3D - 65 287 - -
Car02g01183 365 Pfam Cyclin, C-terminal domain 197 299 IPR004367 -
Car02g01183 365 SMART cyclin_7 100 188 IPR013763 -
Car02g01183 365 MobiDBLite consensus disorder prediction 335 365 - -
Car02g01183 365 SMART Cyclin_C_2 197 313 IPR004367 -
Car02g01183 365 MobiDBLite consensus disorder prediction 350 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01183 Car-Chr2 35606482 35610300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01183 62 338 Core Cell Cycle Gene Families AT2G22490 47.122 4.77e-78 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01183 K18810 - gmx:100803873 448.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01183 02 35606482 35610300 Car02g01183 02 35606482 35610300 ECH