Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01162 ATGAGAAGGTTCACGTTGTTAACGCCGTTTCGGCGCCATTTTCTTTCATCTATTGCATCCGAACCTCTCCTTGATAAAGGAAATTCGTTCTCAAAATTCTTCTCCTCTCGCCAATCGTTGTTGCTTTCACGAACTTTGTTCGGTTGCAGTTTTGTAACGAAAAAGGAGGAGTCTATAATTCCGGGAATTCCTTTGCGATATCGTTATGTTCATGCCACAGCAGCATATTCTTCTTCTGCTGAACGGGACTATTATCAGATGCTTGGTGTTCCTGAAAATGCCAGTCAGGATGAGATTAAGAAGGCATTTCACTTGCTTGCTAAAAAGTACCATCCAGATGCGAATAAGAATAATCCATTTGCAAAGAGGAAATTTCAAGATATACGAGAAGCTTATGAGACATTGAGAGACTCGAAAAAAAGGGCATACTATGACAAGATGCGTACTCATGGTTCAGAGAACACAGAATATGGTAATGGATATGATGATGCAGAAAGATTTCGAAATGCTTATCGTTCTCATTTTTCTGATTCATTTCATAAAGTATTCTCTGAGATATTTGAGGAAGCAACAACTCAGTTCTCGTCAAATATAGAGGTGGAGTTATCACTCACTTTCTCAGAAGCTGCGAGAGGATGCACCAAACATGTGTCATTTGATGCAGCAGTTCCGTGTGATTGCTGCAATGGACGGGGATTTCCACAAAATGCTACCCCAAAAGTTTGTCCAACATGCAGGGGCTTAGGTCGAGTTACAATCCCACCATTTACATCAACATGCATTACTTGTAAAGGATCTGGCCGCATCATTAAGGAGTTTTGTTTGTCGTGTGGAGGATCTGGGGTTATTGAAGGGATTAAAGAGGTTAAAGTTACAATACCAGCAGGAGTGGATTCGGGAGATACAATCCATGTGCCGGAAGGTGGGAATGCTGCTGGAAGTAGTGGTCGACATGGAAGTTTATACATTAAAATAAAGGTGGCCAAGGATCCAGTCTTTGTGAGGGATGGGGCAGATATCTACGTGGAATCTAATATTAGCTTTACACAGGCTATTCTTGGTGGCAAAGTTGAGGTGCCTACTTTATCAGGGAATATGCAAGTAAAAATACCTAAGGGTGTTCAACCAGGACAACTGCTAGCATTTAGAGGCAAAGGACTGCCAAAGCATGGGTATTTTGTACATCATGGGGATCAGTATGTGCGTTTTCGTGTAAACTTTCCAGTTGCAATCAACGAACGACAACGTGCTATACTTGAAGAATTTGCAAAGGAGGAAATAAAGGAGGGAAGTAGTTCAATATTTGAAGGAAATTGGTGGCAGCAAATTCTTGAATACACGACTGGTCCAAAGTTTATGCTGGAACTATCTGTGCTGATACTATTCCTTGTCTTCATTAACAAAATGTTGAGCTGA 1416 0.411 MRRFTLLTPFRRHFLSSIASEPLLDKGNSFSKFFSSRQSLLLSRTLFGCSFVTKKEESIIPGIPLRYRYVHATAAYSSSAERDYYQMLGVPENASQDEIKKAFHLLAKKYHPDANKNNPFAKRKFQDIREAYETLRDSKKRAYYDKMRTHGSENTEYGNGYDDAERFRNAYRSHFSDSFHKVFSEIFEEATTQFSSNIEVELSLTFSEAARGCTKHVSFDAAVPCDCCNGRGFPQNATPKVCPTCRGLGRVTIPPFTSTCITCKGSGRIIKEFCLSCGGSGVIEGIKEVKVTIPAGVDSGDTIHVPEGGNAAGSSGRHGSLYIKIKVAKDPVFVRDGADIYVESNISFTQAILGGKVEVPTLSGNMQVKIPKGVQPGQLLAFRGKGLPKHGYFVHHGDQYVRFRVNFPVAINERQRAILEEFAKEEIKEGSSSIFEGNWWQQILEYTTGPKFMLELSVLILFLVFINKMLS 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01162 471 Gene3D - 328 435 - -
Car02g01162 471 PRINTS DnaJ domain signature 85 103 IPR001623 -
Car02g01162 471 PRINTS DnaJ domain signature 103 118 IPR001623 -
Car02g01162 471 PRINTS DnaJ domain signature 120 140 IPR001623 -
Car02g01162 471 PRINTS DnaJ domain signature 140 159 IPR001623 -
Car02g01162 471 Gene3D DnaJ domain 79 196 IPR036869 -
Car02g01162 471 PANTHER CHAPERONE PROTEIN DNAJ 1, MITOCHONDRIAL 33 449 - -
Car02g01162 471 Gene3D - 225 281 - -
Car02g01162 471 CDD DnaJ_C 196 408 - -
Car02g01162 471 SUPERFAMILY HSP40/DnaJ peptide-binding domain 197 328 IPR008971 GO:0006457|GO:0051082
Car02g01162 471 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 33 449 - -
Car02g01162 471 SMART dnaj_3 82 140 IPR001623 -
Car02g01162 471 SUPERFAMILY Chaperone J-domain 79 173 IPR036869 -
Car02g01162 471 Pfam DnaJ C terminal domain 198 408 IPR002939 -
Car02g01162 471 SUPERFAMILY HSP40/DnaJ peptide-binding domain 332 419 IPR008971 GO:0006457|GO:0051082
Car02g01162 471 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 212 283 IPR036410 -
Car02g01162 471 Pfam DnaJ domain 83 145 IPR001623 -
Car02g01162 471 ProSitePatterns Nt-dnaJ domain signature. 125 144 IPR018253 -
Car02g01162 471 Hamap Chaperone protein DnaJ [dnaJ]. 80 446 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Car02g01162 471 ProSiteProfiles Zinc finger CR-type profile. 212 286 IPR001305 GO:0031072|GO:0051082
Car02g01162 471 Gene3D - 197 322 - -
Car02g01162 471 ProSiteProfiles dnaJ domain profile. 83 148 IPR001623 -
Car02g01162 471 CDD DnaJ 83 137 IPR001623 -
Car02g01162 471 CDD DnaJ_zf 225 281 IPR001305 GO:0031072|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01162 Car-Chr2 34792788 34804423 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01162 74 150 C2H2 Transcription Factor Family AT1G74250 37.805 2.68e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01162 - - gmx:100809440 721.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01162 02 34792788 34804423 Car02g01162 02 34792788 34804423 ECH