Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01146 ATGAGAGAGAAGAAAGTTGAACCTGATTCTGCAGAGGCTTATACTATGAGAGAATGGTTTGACAAGGAAGGGAGGAACACACCGAGTCAATCTATTTCTAGAGAATCATCTAGTTTTGGTAAAGTAAAGTACAGACTGCAACTGCAGATACAGGATCACACTAGTGTAAAATGGGTTACTGCTTTCCAAAAGGGTGGCGAGGAGATCCTAGGTATACCTACAAAAGACTTGTGTTTTCTAAAATATGAAGAACGCGATGGTGAATGA 267 0.4007 MREKKVEPDSAEAYTMREWFDKEGRNTPSQSISRESSSFGKVKYRLQLQIQDHTSVKWVTAFQKGGEEILGIPTKDLCFLKYEERDGE 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01146 88 Pfam Replication factor-A C terminal domain 41 84 IPR013955 -
Car02g01146 88 PANTHER REPLICATION PROTEIN A SUBUNIT 43 88 - -
Car02g01146 88 MobiDBLite consensus disorder prediction 25 39 - -
Car02g01146 88 PANTHER REPLICATION PROTEIN A SUBUNIT 6 43 - -
Car02g01146 88 MobiDBLite consensus disorder prediction 17 39 - -
Car02g01146 88 PANTHER REPLICATION FACTOR A 1, RFA1 6 43 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Car02g01146 88 PANTHER REPLICATION FACTOR A 1, RFA1 43 88 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Car02g01146 88 Gene3D - 22 88 IPR012340 -
Car02g01146 88 SUPERFAMILY Nucleic acid-binding proteins 41 81 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01146 Car-Chr2 33924897 33925753 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01146 43 88 Core DNA Replication Machinery Family AT5G45400 56.522 1.36e-13 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01146 K07466 - bhj:120090268 73.1738