Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01137 ATGCATCTGTGGGGACACAGTTCACAATATCGAAGAGGACTGGACTCATTGAAACGAACACATCCGCGGCCGTTGTTAGACATTCCATGCTATTGTTGTTCAAAGGGATGTAAGAACAACATTGAGCATCCAAGACCAAAGCCATTGAAGGATTTCAGAACATTGCAAACACACTACAAGAGAAAGCATGGTTCAAAGCCTTTTACTTGTCGCAAGTGTGGGAAACCTTTGGCAGTAAAAGGTGATTGGAGAACTCATGAGAAAAACTGTGGCAAGCGTTGGCTTTGTATTTGTGGTTCAGATTTCAAACACAAGAGGTCACTTAAGGATCATATCAAAGCATTTGGATTTGGACATAGTCCTTTTTCTTCTTCCTCGGATGGTATTTAA 390 0.4128 MHLWGHSSQYRRGLDSLKRTHPRPLLDIPCYCCSKGCKNNIEHPRPKPLKDFRTLQTHYKRKHGSKPFTCRKCGKPLAVKGDWRTHEKNCGKRWLCICGSDFKHKRSLKDHIKAFGFGHSPFSSSSDGI 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01137 129 SUPERFAMILY beta-beta-alpha zinc fingers 53 88 IPR036236 -
Car02g01137 129 PANTHER ZINC FINGER PROTEIN WIP2 1 123 - -
Car02g01137 129 PANTHER ZINC FINGER PROTEIN WIP2 1 123 IPR043584 GO:0003700|GO:0010468
Car02g01137 129 Gene3D Classic Zinc Finger 45 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01137 Car-Chr2 32888971 32889360 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01137 1 124 C2H2 Transcription Factor Family AT1G34790 77.419 7.12e-71 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Car02g01137 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01137 - - cam:101514022 254.218