Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01120 atgtgggactttaTTAATGTTGATTGTTCACCTAAGCTAGAATTGTATGTTAAACAATCACATAGTACCACCTCTGAGGCCCAACATTCTCCATCTAGCATCCAAAAGGCTATTGCTGAATTTGTGGGTACATACATTCTTTTATTTGCTGGCTGTGGGGCTGCACTTGTCAACGAGAGGTTACCGATCACAATTGTTGACATAGCAATTGTTTCCGGCTTCGCTTTAACTGTCGCTATATATTCAGTTGGTCACGTATCTGGTGCCCATTTCAATCCTGCTGTCACAATTGCTTTGGCTGTTGTCCAAAAAATTCAATTGAAACTTGTGCCTGTTTATGTGTTGTGTCAGTTAATGGGTGCCACACTGGCCACACTCACACTCAAAGTGTTGTATCATGACAAGGTGGATATTGGAGTAACAGTGACCCAATACTCGAATTCAACTTCTGATCTTGAAGCATTGGTTTGGGAATCCATAATCACTTTCATACTGGTGCTAATTATTTGTGGTGTTGCCACTGATCACAGAGGGAGCAAAGAACTAGCTGGTGTTGCAATAGGTATTTCAGTTACGATTAATATCATCATTGCCGGGCCTATCACGGGAGCTTCCATGAATCCTGCAAGGAGTGTGGGACCGGCCATAGTATCAGGCAATTACAAAAACATTTGGGTTTTTATCATTGGCCCAACTGTGGGAGCAGTTTTTGCAACTGTGCTTTACACTTTCCTAAGAGTAACAAAACCAGCTCAACCAGAAGAACCATGTCATGTGTGA 780 0.4141 MWDFINVDCSPKLELYVKQSHSTTSEAQHSPSSIQKAIAEFVGTYILLFAGCGAALVNERLPITIVDIAIVSGFALTVAIYSVGHVSGAHFNPAVTIALAVVQKIQLKLVPVYVLCQLMGATLATLTLKVLYHDKVDIGVTVTQYSNSTSDLEALVWESIITFILVLIICGVATDHRGSKELAGVAIGISVTINIIIAGPITGASMNPARSVGPAIVSGNYKNIWVFIIGPTVGAVFATVLYTFLRVTKPAQPEEPCHV 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01120 259 TIGRFAM MIP: MIP family channel proteins 39 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car02g01120 259 PANTHER AQUAPORIN NIP2-1 15 255 IPR034294 -
Car02g01120 259 PANTHER MAJOR INTRINSIC PROTEIN 15 255 - -
Car02g01120 259 CDD MIP 35 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car02g01120 259 Pfam Major intrinsic protein 30 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car02g01120 259 ProSitePatterns MIP family signature. 90 98 IPR022357 -
Car02g01120 259 SUPERFAMILY Aquaporin-like 29 253 IPR023271 -
Car02g01120 259 PRINTS Major intrinsic protein family signature 72 96 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car02g01120 259 PRINTS Major intrinsic protein family signature 157 175 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car02g01120 259 PRINTS Major intrinsic protein family signature 109 128 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car02g01120 259 PRINTS Major intrinsic protein family signature 188 210 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car02g01120 259 PRINTS Major intrinsic protein family signature 35 54 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car02g01120 259 PRINTS Major intrinsic protein family signature 225 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car02g01120 259 Gene3D Glycerol uptake facilitator protein. 8 255 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01120 Car-Chr2 31710168 31711815 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01120 30 252 Major Intrinsic Protein MIP AT5G37820 48.485 1.92e-66 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01120 K09874 - gmx:100798380 382.874