Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01105 ATGACAAACCAGAATATGTTAGTTAAGTCACGTGACTCACGTGTGAATCATAGGCTTATGGAGTTAGCAATGTCAATTTCAAACTCTAATGTTTTACCAAGAACAGCTATGCCTGAATTGATGGGTTTACTTGGTGGGCTTTTGGTCCAGCCCAAAAACAAACTCATTAAACCTTTGGAAGACGGAAGTGGAAAAGGAACAACTAAAGTTAACACATGGATTGATTCCATGAGAGCTTCATCTCCTACTCGAGTCAAAAATAGTTCTGAAAATCGAGACCAAAGTTATTGGACTATTTTCCATCCTTCGGCGTTGAACATGTTTAATCAGATAATATACAAATCAAATGAGAAACAAATTGTAGTGTTTCTTGACTATGATGGAACTCTCTCCCCAATTGTTGCAGATCCAAATAGAGCATACATGAGCAAAAAGATGAGAGCGACATTAAAGAACATTTCAAGGCATTTTCCCACAGCCATCGTTAGTGGAAGGTGCTTAGACAAGctatttagttTTGTAAGATTGGCTGAACTTTACTATGCTGGAAGCCATGGCATGGATATCAAGGGACCAACAAATAGGAGAAGCACTGAGAGAGGTAGTAATGATGGGGTACTTTTGCAGCCTGCAAGTGAATTCTTGCCAATGATCAATGAGGTTTATAAGATCTTGGTGGAAAAAACAAAGTCTGTTCCAGGGGCTATGGTGGAAAATAACAAATTTTGTTTGTCTGTGCATTTTCGCTGCGTTGACGAAAAGAGTTGGGCAACATTGGCTGAGCAAGTTAGCTTAGTGCTCAATGAGTACCCAAAGTTGAAACTAACTCAAGGGAGAAAAGTGTTAGAGATTCGACCAACTATAAAATGGGACAAGGGAAGGGCTCTTGAATTTTTGTTAGAGTCACTTGGATTTGCAAATTCTAACAACGTATTTCCTATTTATATTGGCGATGATCGAACTGACGAAGATGCTTTTAAGGTTTTACGCAATAAGGGCCAAGGGATTGGGATTCTAGTTTCTAAAATTGCAAAAGAAACCAACGCTTCATACACTTTGCAAGATCCAACTGAGGTAATTAATTGA 1086 0.3849 MTNQNMLVKSRDSRVNHRLMELAMSISNSNVLPRTAMPELMGLLGGLLVQPKNKLIKPLEDGSGKGTTKVNTWIDSMRASSPTRVKNSSENRDQSYWTIFHPSALNMFNQIIYKSNEKQIVVFLDYDGTLSPIVADPNRAYMSKKMRATLKNISRHFPTAIVSGRCLDKLFSFVRLAELYYAGSHGMDIKGPTNRRSTERGSNDGVLLQPASEFLPMINEVYKILVEKTKSVPGAMVENNKFCLSVHFRCVDEKSWATLAEQVSLVLNEYPKLKLTQGRKVLEIRPTIKWDKGRALEFLLESLGFANSNNVFPIYIGDDRTDEDAFKVLRNKGQGIGILVSKIAKETNASYTLQDPTEVIN 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01105 361 Gene3D - 122 353 IPR023214 -
Car02g01105 361 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 3 359 - -
Car02g01105 361 CDD HAD_TPP 121 361 - -
Car02g01105 361 Gene3D - 202 287 - -
Car02g01105 361 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 122 330 IPR006379 -
Car02g01105 361 Pfam Trehalose-phosphatase 123 356 IPR003337 GO:0003824|GO:0005992
Car02g01105 361 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 3 359 IPR044651 GO:0004805|GO:0005992
Car02g01105 361 SUPERFAMILY HAD-like 121 360 IPR036412 -
Car02g01105 361 TIGRFAM T6PP: trehalose-phosphatase 118 360 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01105 Car-Chr2 30697352 30700153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01105 112 360 Trehalose Biosynthesis Gene Families AT1G70290 25.283 5.43e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01105 K01087 - gmx:100792915 538.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01105 02 30697352 30700153 Car02g01105 02 30697352 30700153 ECH
Car02g01105 02 30697352 30700153 Car05g01604 05 60712733 60715117 PCT