Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01096 ATGGAGGTTTCACATGCCCATTTGGGCCACTGCTGCCTGCCTACAGCTTGCATTCTCATCAATTCCTACCTACTTATTAATCTCGGaagtgatggagaaatttcagaagtgGTTGATGCTGCACCATTCAAGCAGTGGTACCTTCAGCACTATGGTGTTGAAATTGGTAGAAAAAAGAAATCAGCTGCAACCAAGAAGGATTCTACAGAGTAG 213 0.3944 MEVSHAHLGHCCLPTACILINSYLLINLGSDGEISEVVDAAPFKQWYLQHYGVEIGRKKKSAATKKDSTE 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01096 70 Gene3D Ribosomal protein S8e, subdomain 41 70 IPR042563 -
Car02g01096 70 PANTHER CMV 1A INTERACTING PROTEIN 1 38 70 - -
Car02g01096 70 PANTHER 40S RIBOSOMAL PROTEIN S8 38 70 IPR001047 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01096 Car-Chr2 30091744 30092804 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01096 38 70 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 66.667 4.33e-10 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01096 K02995 - sspl:121747156 48.1358