Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01091 ATGGCAGGTAGAATGGATTTCTTCAACAATTCACAAGATCCATTCAATGGTGGTGAGTTAATGGAAGTTCTAGAACCTTTTATGAAGAGTTCTTCTTCCACTGCTACTCCCTCTCCATCTGCACCCCTTTATTTAAATTCACACCTCCCTTCAACTTCATCTGAATTTTACTCTTCTACCCCTCCCTTTTTCCAAtcttcttcttctcttcctcctttacctttaccttctccttctctttcattttcAACACAGCCCAATTTCTACACAGAAGGTTGTTCTTCAATGATGACCTATCTATTTCCCTCAGGTTCATCACAAAGCCAAAATTTCATAGGCTTTGAGCAACCCAATTCTGTTATTGGGCTAAACAACTTAACCCCATCTCAAATTAACCAGATCCAAGCCCAGATCCATCTTCAAGCCCAAAATCTAAACAACAACACAAATCTCAGCTTCCTTGGGCCTAAGCCCATCCCAATGAAACAACCTGGTGTACCTCCAAAGCCCACTAAGCTTTACAGAGGTGTAAGGCAAAGACATTGGGGAAAATGGGTTGCTGAGATAAGACTACCAAAGAACAGAACAAGGCTTTGGCTTGGTACTTTTGAAACTGCTGAAGAAGCTGCTTTGGCTTATGATAGAGCTGCTTATAGACTCAGAGGTGATTTTGCTAGGCTTAATTTCCCAAACATGAAGAATCAACAAGGTGATGTGAAGAAACAAGGGCATGTTGAAAAAAGTGTGAGAGGTTCTTCTAAGAAGTCTTTGAAAGATGCTAAGACAATTGTTGTTGAGAATAATAATGATGACAACAAGGTTGATGCTTCTTTGTCTCCCGTTATGACTGAGAGTGAAGGCTCTGATGATTCTTCTCCACTTTCTGATCTTACTTTTGGTGATATCACTGAACCACAATGGGAAGCTGGTTCTGAACAATTTAATCTTCAAAAGTTTCCTTCTTATGAGATTGATTGGGATTCTCTTTGA 990 0.3788 MAGRMDFFNNSQDPFNGGELMEVLEPFMKSSSSTATPSPSAPLYLNSHLPSTSSEFYSSTPPFFQSSSSLPPLPLPSPSLSFSTQPNFYTEGCSSMMTYLFPSGSSQSQNFIGFEQPNSVIGLNNLTPSQINQIQAQIHLQAQNLNNNTNLSFLGPKPIPMKQPGVPPKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFETAEEAALAYDRAAYRLRGDFARLNFPNMKNQQGDVKKQGHVEKSVRGSSKKSLKDAKTIVVENNNDDNKVDASLSPVMTESEGSDDSSPLSDLTFGDITEPQWEAGSEQFNLQKFPSYEIDWDSL 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01091 329 CDD AP2 172 231 IPR001471 GO:0003700|GO:0006355
Car02g01091 329 Pfam AP2 domain 174 222 IPR001471 GO:0003700|GO:0006355
Car02g01091 329 ProSiteProfiles AP2/ERF domain profile. 173 230 IPR001471 GO:0003700|GO:0006355
Car02g01091 329 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 1 328 - -
Car02g01091 329 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-4 1 328 - -
Car02g01091 329 SUPERFAMILY DNA-binding domain 173 230 IPR016177 GO:0003677
Car02g01091 329 MobiDBLite consensus disorder prediction 239 268 - -
Car02g01091 329 SMART rav1_2 173 236 IPR001471 GO:0003700|GO:0006355
Car02g01091 329 MobiDBLite consensus disorder prediction 229 302 - -
Car02g01091 329 MobiDBLite consensus disorder prediction 269 299 - -
Car02g01091 329 Gene3D AP2/ERF domain 173 231 IPR036955 GO:0003700|GO:0006355
Car02g01091 329 PRINTS Ethylene responsive element binding protein signature 196 212 IPR001471 GO:0003700|GO:0006355
Car02g01091 329 PRINTS Ethylene responsive element binding protein signature 174 185 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01091 Car-Chr2 29759985 29761049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01091 1 329 AP2-EREBP Transcription Factor Family AT1G78080 44.032 2.31e-73 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Car02g01091 AP2 4.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01091 K09286 - jre:108984027 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01091 02 29759985 29761049 Car02g01091 02 29759985 29761049 ECH
Car02g01091 02 29759985 29761049 Car05g01601 05 60689902 60691534 PCT