Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01088 ATGAAACAACGCAACTTCCCTTCAAACTTAGAATCTGTAATGTTTGGAAGCGTCTTGCAAGGTGTAGACTCTTCTAGGCGAAATGCATTGATCATCAAGCAGATCATGCGCCATATAATTACTTCGCTAAAGAAAATTCATGATACATGCATCGTTCACAGAGATATAAAGACAGCCAACTTAGTGGTTACTAAACGGGGGCAGATTAAACTCATTGATTTTAGTGCAGCAACAGACCTGAGGATTGAAAAGAATTATGTTCCCGATTGCACTCTTTTGGATCCCAACTATTGCCCTCTAGAACTATATGTACTCCCAGAAGAAACACCAAGTCCTCCACCAGAGCCTATTGCTGCTATCTTTTCACCAATCCTATGGCAGTTAAACAACCCTGATCTATTTGATATGTACTCTGCTGGGATTGTACTCCTGCAAATTGCAATACCAACCTTAAAGTCTCCTGTTGCTTTGAAGAATTTCAATTTGGAAATAAAAACATGTGGATATCATTTGAAAAAATGGAGGAGAACACTCGCCTCAGACCCGACTTTCAAATTCTTGATAGTGAATCTGGTAGAGGGTGGGACTTAG 591 0.3993 MKQRNFPSNLESVMFGSVLQGVDSSRRNALIIKQIMRHIITSLKKIHDTCIVHRDIKTANLVVTKRGQIKLIDFSAATDLRIEKNYVPDCTLLDPNYCPLELYVLPEETPSPPPEPIAAIFSPILWQLNNPDLFDMYSAGIVLLQIAIPTLKSPVALKNFNLEIKTCGYHLKKWRRTLASDPTFKFLIVNLVEGGT 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01088 196 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC 1 187 - -
Car02g01088 196 ProSitePatterns Serine/Threonine protein kinases active-site signature. 51 63 IPR008271 GO:0004672|GO:0006468
Car02g01088 196 Gene3D Transferase(Phosphotransferase) domain 1 21 193 - -
Car02g01088 196 Pfam Protein kinase domain 31 100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01088 196 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 1 187 IPR044803 GO:0004674|GO:0009579
Car02g01088 196 ProSiteProfiles Protein kinase domain profile. 1 196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01088 196 SUPERFAMILY Protein kinase-like (PK-like) 27 148 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01088 Car-Chr2 29688151 29689053 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01088 31 146 MAP Kinase Kinase Kinase AT5G66850 28.571 4.23e-09 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Car02g01088 Pkinase 3.8e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01088 - - cam:101497342 300.441