Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01087 ATGTCCAAGAGCATGCTGGGAACGAGAAATCTTGCGTTTGGCATGCTAGGGATTTTGTTGATGTCGTTTTCCATCTATTTAAACAGTTATATCCGTTTCACAGTGTGTGGAGTTAGAGGCACTTCTCTCATGTCTGGATTCGTCTTCCTAACCTGTACAGATCAAGATGATACAAGGCACAAATTTGGTCACTATGGAGGTTTCACATGCCCATTTGGGCCACTGCTGCTTACAACTTGCATTCTCATCAATTCATACCTACTTATTAATCTCGGGTACGGGCTCGGTCGTCATCTAGCAAGCACTAAATTATCAAGCAACAAGACAATCAAAAGGATTCGTGTTCGAGGGGGTAATGTGAAGTGGAGAGAAATTAGATTGGATACCGATAACTTCTCATGGGACAGTGAAGCAATAACTCGCAAGACTCGTCTTCAGGATATGGTTGATGCTGCACCATTCAAGCAGTATGGTGTTGAAATTGGTAGAAACATCACTATGGTGTTGAAATTGGTAGAAAAAAGAAATCAGCTGCAACCAAGAAGGATTCTGCAGAGTAGTTGGCTTTTCTTTCAAATCGGATGTCTTTTTTCTCAAGATCGTCAGCTAGATTCCCACATTGAAGAGCAGTTTGGTGGTGGTCGTTTGTTGGCCTGTATTTCATCTCGTCCAGGTCAATGTGGCAGGGTTCATGGATACATCCTCGAAGGTAAGGAACTAAAATTTTCCATGAAGAAGTTACAGAGGAAGAAGGGAAATGGTGCTGCTTAA 771 0.4228 MSKSMLGTRNLAFGMLGILLMSFSIYLNSYIRFTVCGVRGTSLMSGFVFLTCTDQDDTRHKFGHYGGFTCPFGPLLLTTCILINSYLLINLGYGLGRHLASTKLSSNKTIKRIRVRGGNVKWREIRLDTDNFSWDSEAITRKTRLQDMVDAAPFKQYGVEIGRNITMVLKLVEKRNQLQPRRILQSSWLFFQIGCLFSQDRQLDSHIEEQFGGGRLLACISSRPGQCGRVHGYILEGKELKFSMKKLQRKKGNGAA 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01087 256 PANTHER 40S RIBOSOMAL PROTEIN S8 93 151 IPR001047 GO:0003735|GO:0005840|GO:0006412
Car02g01087 256 PANTHER 40S RIBOSOMAL PROTEIN S8 149 256 IPR001047 GO:0003735|GO:0005840|GO:0006412
Car02g01087 256 Gene3D - 96 251 - -
Car02g01087 256 PANTHER 40S RIBOSOMAL PROTEIN S8 93 151 - -
Car02g01087 256 PANTHER 40S RIBOSOMAL PROTEIN S8 149 256 - -
Car02g01087 256 Pfam Ribosomal protein S8e 94 235 IPR022309 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01087 Car-Chr2 29650242 29655251 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01087 93 244 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 53.297 1.77e-53 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01087 K02995 - gmx:100500112 192.2