Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01081 ATGAGAGAACAAAGGGTCCTTCATATTGGTGATACTAGTCAAATAGAAAGTTCCAAGTGGGTTTTGGATTCTCCTAACCCACCACCATTATGGAAGAAGCTGTTGAGTTCAGTGAAAGAAACCATTTTGCCTGATGGGAACAAGTTCTGTTTTTTCTTATCCAAGAAAAAAACTTTACATGAGCATGCTTTCTCATTCTTGCAGAGTTTGTTCCCAATCCTTGTTTGGTTAAAAGATTACACAGCCTCCAAATTTAAAGATGACCTTTTAGCCGGTTTAACTCTTGCAAGCTTGTGCATACCTCAGAGCGTAGGATATGCAAGTTTGGCAAAAGTTGATCCACAATATGGCCTGTATACCAGTATTGTTCCTCCTCTTATTTATGCTGTGATGGGGAGCTCAAGAGATATTGCAATTGGACCTGTAGCTGTAGTGTCTATGCTGTTATCTTCCTTGGTCACCAAAGTCATAGATCCTGTTGCTAATCCCCATGCCTATAGAGATTTTGTCTTTACTGTGACCTTCTTTACCGGAATTTTTCAGGCCGGATTCGGTATTTTCAGGTTGGGGTTTCTTGTTGATTTTCTTTCACATGCTGCATTAGTTGGATTCATGGCAGGCGCAGCTGTCATTATCAGTCTTCAGCAACTCAAGGGGCTACTAGGGATTACTCACTTCACCACTAAAACAGATGCAGTTTCAGTATTGGTGTCTGTTTTTAAGTCATTACATCAGCAAATTACTTCCGAAGAAAAATGGAGCCCTCTGAATTTTATCCTGGGGTGTTCTTTCTTGATTTTCCTTCTAGTTACCCGATTTATAGGAAAAAGAAACAAAAAACTTTTCTGGTTGCCTGCTATAGCCCCTCTTCTGTCGGTTATACTGTCAACTTTAATTGTGTATTTGTCAAAAGCTGATAAACAAGGGGTTAATGTAATAAAGCACGTCAAAGGAGGGCTGAATCAGAGTTCAGTTCACCAGTTACAATTCCACGGTCAACATGTTGGGCAAGCGGTGAAAATCGGATTAGTTTGTGCGGTTATCGCCTTAACTGAAGCAATGGCTGTCGGTCGATCTTTCGCATCCATTAAGGGATATCATCTTGATGGGAACAGAGAAATGTTGTCAATGGGAATCATGAACATTGCTGGATCCTTAACTTCATGCTACGTGGCAACTGGTTCTTTTTCAAGGACAGCAGTTAATTATAGTGCAGGATGTCAAACAGCAGTCTCAAATATTGTGATGGCCATTACTGTGATTTTGTTCTTGCAATTATTTGCAAGGCTCTTGTACTACACCCCTATGGCTATCCTTGCTGCTATCATCCTCTCTGCACTTCCTGGATTAATCGATGTAAATGAGGCTCGCTATATTTGGAAGGTTGACAAATTAGACTTTCTTGCATGTATTGGAGCTTTCGTTGGCGTCTTGTTTGCATCTGTAGAGATTGGTCTCCTTGTAGCTGTGACAATCTCATTTGCAAAGATACTAATACAATCAATTCGACCTGGAGTAGAAATTCTAGGTAGAGTTCCAAGAACAGAAGTCTTCTGTGATGTAACTCAATATCCCATGGCTGTAAGCACGCCAGGCATCCTAGTGATTCGCATAAGTTCCGGCTCACTCTGCTTTGCAAATGCCAATTTTGTCAAAGAAAGAATACTGAAGTGGGTCGTGGAAGAAGACGACATTCAAGAAACTTCCAAGGGAAATGTCCGAGCCATAATCATGGACATGACAAACTTGATGAATGTTGATACTTCCGGAATTCTAGCACTTGAGGAATTGCATAAGAGGCTGCTTTCACGTGGCGTAGAATTAGCTATGGTCAACCCAAGGTGGCAAGTAATTCACAAGCTCAAGCTTGCACACTTTGTGGACAAAATTGGGAAACAATGGGTTTTTCTGACCGTTGGAGAGGCCGTAGATGCATGTCTCTCTTCTAAAATCGCTACAGCTTGA 1965 0.4122 MREQRVLHIGDTSQIESSKWVLDSPNPPPLWKKLLSSVKETILPDGNKFCFFLSKKKTLHEHAFSFLQSLFPILVWLKDYTASKFKDDLLAGLTLASLCIPQSVGYASLAKVDPQYGLYTSIVPPLIYAVMGSSRDIAIGPVAVVSMLLSSLVTKVIDPVANPHAYRDFVFTVTFFTGIFQAGFGIFRLGFLVDFLSHAALVGFMAGAAVIISLQQLKGLLGITHFTTKTDAVSVLVSVFKSLHQQITSEEKWSPLNFILGCSFLIFLLVTRFIGKRNKKLFWLPAIAPLLSVILSTLIVYLSKADKQGVNVIKHVKGGLNQSSVHQLQFHGQHVGQAVKIGLVCAVIALTEAMAVGRSFASIKGYHLDGNREMLSMGIMNIAGSLTSCYVATGSFSRTAVNYSAGCQTAVSNIVMAITVILFLQLFARLLYYTPMAILAAIILSALPGLIDVNEARYIWKVDKLDFLACIGAFVGVLFASVEIGLLVAVTISFAKILIQSIRPGVEILGRVPRTEVFCDVTQYPMAVSTPGILVIRISSGSLCFANANFVKERILKWVVEEDDIQETSKGNVRAIIMDMTNLMNVDTSGILALEELHKRLLSRGVELAMVNPRWQVIHKLKLAHFVDKIGKQWVFLTVGEAVDACLSSKIATA 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01081 654 SUPERFAMILY SpoIIaa-like 529 646 IPR036513 -
Car02g01081 654 TIGRFAM sulP: sulfate permease 72 642 IPR001902 GO:0015301|GO:0016020|GO:0055085
Car02g01081 654 PANTHER SLC26A/SULP TRANSPORTER-RELATED 8 652 - -
Car02g01081 654 Pfam STAS domain 524 642 IPR002645 -
Car02g01081 654 ProSitePatterns SLC26A transporters signature. 114 135 IPR018045 GO:0008271|GO:0008272
Car02g01081 654 ProSiteProfiles STAS domain profile. 540 646 IPR002645 -
Car02g01081 654 PANTHER SULFATE TRANSPORTER 8 652 IPR001902 GO:0015301|GO:0016020|GO:0055085
Car02g01081 654 Pfam Sulfate permease family 85 471 IPR011547 GO:0016021
Car02g01081 654 Gene3D STAS domain 503 649 IPR036513 -
Car02g01081 654 CDD STAS_SulP_like_sulfate_transporter 524 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01081 Car-Chr2 28569384 28573731 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01081 13 651 Inorganic Solute Cotransporters AT5G10180 62.773 0.0 835
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01081 K17469 - gmx:100776591 1072.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01081 02 28569384 28573731 Car02g01081 02 28569384 28573731 ECH
Car02g01081 02 28569384 28573731 Car05g01591 05 60552535 60556815 PCT