Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01064 ATGGCGGCTTCTGTTGATAACCGTCAGTTCCGTAGCCTAAACGGCGTGGCACACAACTTCAACTCCGGCAACAACTGCAGCCACAACCTAAAACCAGGATTTCCGGTCGATTTTAATTCCTTCAGCAGCGATGAGGAAAGCGATGACGCATCAAACCTCCAGGAACTCATAGGAAAAACGAACGCGGAAATTGAACCGTCTATTCAAGACCCACGAGACGAAGGGACATTAGACAACTGGATTACACGAAACGCTTCCATGGTCCGTCTCACAGGGAAACACCCCTTTAACTCAGAACCGCCCCTTCCTCGTCTCATGCACCACGGTTTCATTACCCCAGTTCCAATCCACTACGTTCGAAACCACGGTGCAGTCCCAAAAGCTCGTTGGGAAGACTGGACCGTCGAAGTAACGGGTCTAGTTAAAAACCCAACCCGATTCGCTATGGACCGGCTCGTTCGCGAGTTTCCAAGTCGCGAGTTTCCTGTTACATTAGTCTGCGCTGGTAACCGACGCAAAGAACAGAACATGGTGAAACAAAGCATTGGATTCAACTGGGGAGCCGCAGCGGTTTCAAACTCCGTCTGGCGCGGGGTTTCTTTACGCCACGTGCTTAAACGCTGTGGCATCCACGCGCGTTCCAAGGGTGCAGTTCATGTTTGTTTCTATGGCGCTGAGGATTTGCCTGGTGGTGGTGGGTCCAAGTATGGAACAAGTATCAAGAGGGAAATTGCTATGGACCCTTCGCGTGATGTTATTCTTGCTTATATGCAGAATGGAGAGGCTTTGACTCCTGATCATGGTTTTCCTGTTCGTGTTATTATACCTGGTTTCATTGGCGGTCGTATGGTTAAATGGCTTAAACGAATTGTTGTTACTTCTGATGAATGTGATGGTCATTACCATTATAAAGATAATAGAGTATTTCCTTCTCATGTTGATGCAGAACTCGCAACCGAAGAAGGATGGTGGTACAAGCCGGAATATATTATTAACGAGCTGAACATAAATTCGGTGATTACGACGCCGTGTCATGACGAGATATTGCCCATAAACTCATGGACTACGCAGAGGCCTTATACACTGAGAGGGTATTCATATTCCGGGGGTGGAAGGAAGGTGACACGTGTTGAGGTAACAATGGACAGTGGAGAATCGTGGCACGTGTGCGCATTGGACCACCCAGAAAAACCAACCAAATACGGGAAATATTGGTGCTGGTGCTTCTGGTCTTTAGAAGTAGAGGTACTGGACCTACTTGGGACCAAGGAGATTGCTGTCCGCGCATGGGATGAGGCCCTCAACACCCAGCCTGAAAACCTCGTTTGGAATGTTATGGGAATGATGAACAACTGCTGGTTCAGGGTAAAAACAAACGTGTGTAGGCCCCACAAAGGCGAAATCGGAATAGCATTTGAACACCCAACACAACCAGGTAACCAATCAGGTGGTTGGATGGCAAAAGAAAGATACTTAGAAAGATCACAACACGCCAATCCAATTCTCAAAAAAAGTGTCTCCTCCCCATTCATGAACACCACATCAGAAACATACTCCCTCTCTGAAGTTAAAAAACATAAAACCTTTGATTCAGCTTGGATCATTGTCCACGGCCAGGTCTATGACTGCACACGCTTCCTTAAAGACCACCCTGGCGGCTCCGACAGCATCCTCATCAACGCCGGCACCGATTGCACGGACGAATTCGAAGCCATCCATTCCGACAAGGCAAAGAAATTGCTCGAAGATTATAGAATTGGGGAGCTTGTTACCACTGGCTACACCTCAGATTCATCCTCCCCAAATAATTCCATTCACGGAAATTCCGAATTTACCCATCTCGCCCCTATCAAAGAAATCACAACACCACCACACCCTGTGGCTCTTCACCCACGTGAGAAAATCCCATGCAAGCTTATTTCAAAAACCTCAATTTCACATGATGTAAGACTCTTCCGTTTTGCATTACCTTATGAAGACCAACAATTGGGATTACCCATTGGGAAACACATTTTCTTATGTGTTGCCATAGATGGGAAACTATGCATGCGAGCTTATACTCCAACGAGTAGTGTCGATGAAATTGGGTATTTTGATTTAGTTGTCAAAATTTACTTCAAAAACGTGCACCCTAAGTTTCCTAATGGTGGACTTATGTCACAATATTTGGACTCACTTACTATTGGGTCAATATTGGACGTAAAAGGTCCAGTGGGTCACATTGAGTATATTGGAAGTGGAAACTTCATGGTTCATGGGAAACAAAGGTTTGCGAAGAAACTAACTTTTATAGCTGGTGGGACCGGGATCACACCTGTTTATCAAGTGGCGCAAGCGATATTCAATGACAGCGATGACCGTACAGAAATATATGTTGTTTATGCGAACCGGACGGAGGATGATATATTGATGAGGAAAGAGTTGGATTTGTGGGCGAAGGTTTATAGTGATAGGTTCAAGGTTTGGTATGTTGTGGAAAGTGCTAAAGAAGGGTGGGAATATAGTGTAGGGTTTATTACGGAGAGTATCATGAGGGAGCATGTTCCTTTGGCAAGTCAGGATACTTTGGCTTTGGCTTGTGGGCCACCACCTATGATTCAGTTTGCTGTGCAGCCTAATTTGGAGAAGATGGGGTATGATATTAAGAAGGATTTGCTAGTGTTTTAG 2667 0.4571 MAASVDNRQFRSLNGVAHNFNSGNNCSHNLKPGFPVDFNSFSSDEESDDASNLQELIGKTNAEIEPSIQDPRDEGTLDNWITRNASMVRLTGKHPFNSEPPLPRLMHHGFITPVPIHYVRNHGAVPKARWEDWTVEVTGLVKNPTRFAMDRLVREFPSREFPVTLVCAGNRRKEQNMVKQSIGFNWGAAAVSNSVWRGVSLRHVLKRCGIHARSKGAVHVCFYGAEDLPGGGGSKYGTSIKREIAMDPSRDVILAYMQNGEALTPDHGFPVRVIIPGFIGGRMVKWLKRIVVTSDECDGHYHYKDNRVFPSHVDAELATEEGWWYKPEYIINELNINSVITTPCHDEILPINSWTTQRPYTLRGYSYSGGGRKVTRVEVTMDSGESWHVCALDHPEKPTKYGKYWCWCFWSLEVEVLDLLGTKEIAVRAWDEALNTQPENLVWNVMGMMNNCWFRVKTNVCRPHKGEIGIAFEHPTQPGNQSGGWMAKERYLERSQHANPILKKSVSSPFMNTTSETYSLSEVKKHKTFDSAWIIVHGQVYDCTRFLKDHPGGSDSILINAGTDCTDEFEAIHSDKAKKLLEDYRIGELVTTGYTSDSSSPNNSIHGNSEFTHLAPIKEITTPPHPVALHPREKIPCKLISKTSISHDVRLFRFALPYEDQQLGLPIGKHIFLCVAIDGKLCMRAYTPTSSVDEIGYFDLVVKIYFKNVHPKFPNGGLMSQYLDSLTIGSILDVKGPVGHIEYIGSGNFMVHGKQRFAKKLTFIAGGTGITPVYQVAQAIFNDSDDRTEIYVVYANRTEDDILMRKELDLWAKVYSDRFKVWYVVESAKEGWEYSVGFITESIMREHVPLASQDTLALACGPPPMIQFAVQPNLEKMGYDIKKDLLVF 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01064 888 PRINTS Eukaryotic molybdopterin domain signature 88 102 IPR008335 GO:0016491
Car02g01064 888 PRINTS Eukaryotic molybdopterin domain signature 110 126 IPR008335 GO:0016491
Car02g01064 888 PRINTS Eukaryotic molybdopterin domain signature 163 174 IPR008335 GO:0016491
Car02g01064 888 PRINTS Eukaryotic molybdopterin domain signature 174 186 IPR008335 GO:0016491
Car02g01064 888 PRINTS Eukaryotic molybdopterin domain signature 189 204 IPR008335 GO:0016491
Car02g01064 888 PRINTS Eukaryotic molybdopterin domain signature 247 263 IPR008335 GO:0016491
Car02g01064 888 PRINTS Eukaryotic molybdopterin domain signature 264 277 IPR008335 GO:0016491
Car02g01064 888 PRINTS Eukaryotic molybdopterin domain signature 280 293 IPR008335 GO:0016491
Car02g01064 888 PRINTS Eukaryotic molybdopterin domain signature 331 343 IPR008335 GO:0016491
Car02g01064 888 PRINTS Eukaryotic molybdopterin domain signature 362 376 IPR008335 GO:0016491
Car02g01064 888 PRINTS Eukaryotic molybdopterin domain signature 376 388 IPR008335 GO:0016491
Car02g01064 888 PRINTS Eukaryotic molybdopterin domain signature 403 413 IPR008335 GO:0016491
Car02g01064 888 PRINTS Eukaryotic molybdopterin domain signature 428 440 IPR008335 GO:0016491
Car02g01064 888 PRINTS Eukaryotic molybdopterin domain signature 441 454 IPR008335 GO:0016491
Car02g01064 888 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 546 553 IPR018506 GO:0020037
Car02g01064 888 Gene3D - 92 332 IPR036374 -
Car02g01064 888 Pfam Oxidoreductase NAD-binding domain 763 870 IPR001433 GO:0016491
Car02g01064 888 SUPERFAMILY Riboflavin synthase domain-like 625 744 IPR017938 -
Car02g01064 888 CDD cyt_b5_reduct_like 637 888 - -
Car02g01064 888 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 549 559 IPR001709 GO:0016491
Car02g01064 888 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 684 691 IPR001709 GO:0016491
Car02g01064 888 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 716 725 IPR001709 GO:0016491
Car02g01064 888 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 762 781 IPR001709 GO:0016491
Car02g01064 888 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 788 797 IPR001709 GO:0016491
Car02g01064 888 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 800 811 IPR001709 GO:0016491
Car02g01064 888 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 832 848 IPR001709 GO:0016491
Car02g01064 888 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 856 864 IPR001709 GO:0016491
Car02g01064 888 Pfam Oxidoreductase molybdopterin binding domain 122 301 IPR000572 -
Car02g01064 888 Pfam Cytochrome b5-like Heme/Steroid binding domain 519 589 IPR001199 -
Car02g01064 888 SUPERFAMILY E set domains 333 460 IPR014756 -
Car02g01064 888 Gene3D Translation factors 625 738 - -
Car02g01064 888 Pfam Oxidoreductase FAD-binding domain 637 743 IPR008333 -
Car02g01064 888 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 515 590 IPR001199 -
Car02g01064 888 SMART Cyt_b5_2 518 590 IPR001199 -
Car02g01064 888 Gene3D - 739 888 IPR039261 -
Car02g01064 888 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 632 744 IPR017927 GO:0016491
Car02g01064 888 CDD eukary_NR_Moco 73 458 - -
Car02g01064 888 Pfam Mo-co oxidoreductase dimerisation domain 329 460 IPR005066 GO:0016491|GO:0030151
Car02g01064 888 PIRSF Nitr_rd_NADH 7 887 IPR012137 GO:0006809|GO:0042128|GO:0050464
Car02g01064 888 Gene3D - 512 593 IPR036400 -
Car02g01064 888 Gene3D - 333 508 - -
Car02g01064 888 PANTHER NADH-CYTOCHROME B5 REDUCTASE 44 888 IPR001834 GO:0016491
Car02g01064 888 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 139 174 IPR022407 GO:0043546
Car02g01064 888 PRINTS Cytochrome B5 signature 540 550 IPR001199 -
Car02g01064 888 PRINTS Cytochrome B5 signature 550 564 IPR001199 -
Car02g01064 888 PRINTS Cytochrome B5 signature 565 572 IPR001199 -
Car02g01064 888 PRINTS Cytochrome B5 signature 577 589 IPR001199 -
Car02g01064 888 PRINTS Cytochrome B5 reductase signature 663 674 - -
Car02g01064 888 PRINTS Cytochrome B5 reductase signature 684 691 - -
Car02g01064 888 PRINTS Cytochrome B5 reductase signature 729 743 - -
Car02g01064 888 PRINTS Cytochrome B5 reductase signature 762 781 - -
Car02g01064 888 PRINTS Cytochrome B5 reductase signature 800 811 - -
Car02g01064 888 PRINTS Cytochrome B5 reductase signature 856 864 - -
Car02g01064 888 PANTHER NITRATE REDUCTASE [NADH] 2 44 888 - -
Car02g01064 888 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 731 880 IPR039261 -
Car02g01064 888 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 513 593 IPR036400 -
Car02g01064 888 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 70 331 IPR036374 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01064 Car-Chr2 26706400 26712817 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01064 627 879 NADPH P450 reductases AT5G17770 38.431 3.72e-49 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01064 K10534 - gmx:100813471 1506.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01064 02 26706400 26712817 Car02g01064 02 26706400 26712817 ECH