Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01028 ATGGGAAAGTGTTGGTTTATTGGGGTATTGATTGTGGTGGGCTATGAGTGCTTGTTTGGAACTAATGTTGGGGTAGAAGGGTACCCAATGGAGGATCTAGTTGTGAGGTTGCCAGGCCAACCCAAGGTTAAATTCAGTCAATATGCTGGCTATGTTGATATAGATGTAAAGCATGGGAAGAGTCTCTTCTACTATTTTGTTGAGGCTGACCACCACCCTCACAAAAAGCCTCTAACACTTTGGCTCAATGGAGGTCCAGGATGTTCCTCCATTGGAGGAGGTGCCTTTACCGAATTGGGTCCATTTTATCCCAGTGGTGATGGACGTGGTCTACGAAGGAATTCAAAGTCTTGGAATAGAGTTTCTAATCTTCTATTTGTGGAGTCTCCTGCTGGAGTTGGTTGGTCATATTCAAATACAACTTCCGATTATGATTCTGATGATGCCTCTACAGCAAATGATATGGTTTTATTCATGTTGAAATGGTACGAAAAGTTTCCTTCCTACGTATCAAGGGGATTGTTTCTTACTGGAGAAAGCTATGCAGGACATTACATACCTCAGTTAACTACTGCTCTTCTTGATTATAATACTCATTCAACCGGTTTCAAATTCAATATAAAAGGAGTTGCTATTGGAAACCCACTTCTTGAATTGAATCGTGATACACAAGCAACATATGAATACTTTTGGTCACACGGAATGATTTCAGATGAAATTGGTATTTCCATTATGAATGATTGCAATTTTGATACAACTAGTGCTAACTTATCTAAATCATGCCAAAATGCCATGGTTGATGCTCAAGACATTGTGGGAAGTTATATTGACGAATATGATGTGATTCTTGACGTTTGTTATCCATCCATAGCTGAACAAGAACTCAAATTGAAAAAAATGGCTAGTAAAATAAGTTTAAGTGTAGATATTTGTATGGACAGTGAAATCTATTTTTACCTCAACCTCCAAGAAGTTCAAAAGTGTCTCCATGCTAATCGTACCAAACTGTCGTACCCATGGTCTATGTGCAGCGATGTTTTAAATTACAAAAATACAGATCATGACATCAGTATGCTTCCAGTTCTCAAACGGATAGTTCAAAACCATATTCCAATATTGATTTACAGTGGAGACCAAGATTCTGTTGTGCCATTAATAGGTTCACGATCACTAGTTCGTCAACTAGCTCGTGACCTAAAGTTCAACATTACAGACCCATATAGAGTTTGGTTCCACAAAGGCCAGGCTGGAGGTTGGGTAACCGAGTATGGAAATTTGTTGACTTTTGCAACAGTAAGAGGAGCAGGTCATATGGTACCATATGCACAACCTTCTAGAGCATTGCATCTATTTAGTTCTTTTGTGGGTGGCAAGAGATTGCCAAACACAACTCGACTTTCAGTTGGCGAATGA 1413 0.3928 MGKCWFIGVLIVVGYECLFGTNVGVEGYPMEDLVVRLPGQPKVKFSQYAGYVDIDVKHGKSLFYYFVEADHHPHKKPLTLWLNGGPGCSSIGGGAFTELGPFYPSGDGRGLRRNSKSWNRVSNLLFVESPAGVGWSYSNTTSDYDSDDASTANDMVLFMLKWYEKFPSYVSRGLFLTGESYAGHYIPQLTTALLDYNTHSTGFKFNIKGVAIGNPLLELNRDTQATYEYFWSHGMISDEIGISIMNDCNFDTTSANLSKSCQNAMVDAQDIVGSYIDEYDVILDVCYPSIAEQELKLKKMASKISLSVDICMDSEIYFYLNLQEVQKCLHANRTKLSYPWSMCSDVLNYKNTDHDISMLPVLKRIVQNHIPILIYSGDQDSVVPLIGSRSLVRQLARDLKFNITDPYRVWFHKGQAGGWVTEYGNLLTFATVRGAGHMVPYAQPSRALHLFSSFVGGKRLPNTTRLSVGE 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01028 470 Pfam Serine carboxypeptidase 39 456 IPR001563 GO:0004185|GO:0006508
Car02g01028 470 Gene3D alpha/beta hydrolase 29 287 IPR029058 -
Car02g01028 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Car02g01028 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Car02g01028 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
Car02g01028 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 427 440 IPR001563 GO:0004185|GO:0006508
Car02g01028 470 ProSitePatterns Serine carboxypeptidases, histidine active site. 427 444 IPR033124 GO:0004185
Car02g01028 470 Gene3D - 358 457 - -
Car02g01028 470 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 6 464 IPR001563 GO:0004185|GO:0006508
Car02g01028 470 ProSitePatterns Serine carboxypeptidases, serine active site. 176 183 IPR018202 GO:0004185
Car02g01028 470 PANTHER CARBOXYPEPTIDASE 6 464 - -
Car02g01028 470 SUPERFAMILY alpha/beta-Hydrolases 32 460 IPR029058 -
Car02g01028 470 Gene3D - 311 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01028 Car-Chr2 21932834 21936702 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01028 318 460 Calmodulin-binding Proteins AT2G22960 28.671 1.13e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01028 K16297 - gmx:100815723 746.117