Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00991 ATGGAGTCCTTCATTCATCTTAGTGTGAAACCTTCCCATGTACCAATCCTACCTATCTCACATGATATTTCTTCTTACAAGAATTGCTTCTACATTGATTTTTATTACTCCAACACAATTTTATTCCTTGGATTCGATTTCCTAAACTCTACCAACAACCCTACAAGTATATATATTGAAAGGTTGTTTATTCCGGTTGAAATCTTATGTAATTGTAGGGAGATGAATCATAATATTGCTATATACAATCACTTTGATTCCGTGCCTACTTACATATTAGATGCGATTCTACCTGGTTTGGAAGAATGTGCTAGAAAAATGGTTGTGGAGAATGATGAAGGACGTGACACACTAGAGATGAAGTTGTGGCTTCACGTTACCACAACTTTAAGACCAATCGAAGAAGAGGAAGATGAAGATGATAGGAATCAAAATGATAATGGTCAAATCCAACAAATAGTTGATTCATTGGAGATATTAGAAATTGATCATTCTTCTTTTGACTCTATTGAAGAATGTTCAATTTGTTTGGAGAAGTTTTGCGATAGTTTAAAGTCAGAAATTGTTAATACAAAATGTTCTCATTTTTTTCATAAAGATTGTATTGTCTCATGGATTAAAAGATGCATCAACCGTTCATCTAATTATTCTTGTCCATTGTGCCGAGGTCAAATAATATAA 681 0.3304 MESFIHLSVKPSHVPILPISHDISSYKNCFYIDFYYSNTILFLGFDFLNSTNNPTSIYIERLFIPVEILCNCREMNHNIAIYNHFDSVPTYILDAILPGLEECARKMVVENDEGRDTLEMKLWLHVTTTLRPIEEEEDEDDRNQNDNGQIQQIVDSLEILEIDHSSFDSIEECSICLEKFCDSLKSEIVNTKCSHFFHKDCIVSWIKRCINRSSNYSCPLCRGQII 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00991 226 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 91 222 - -
Car02g00991 226 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 134 226 IPR013083 -
Car02g00991 226 SUPERFAMILY RING/U-box 172 225 - -
Car02g00991 226 SMART ring_2 173 221 IPR001841 -
Car02g00991 226 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 91 222 - -
Car02g00991 226 Pfam Ring finger domain 172 222 IPR001841 -
Car02g00991 226 ProSiteProfiles Zinc finger RING-type profile. 173 222 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00991 Car-Chr2 18588704 18589384 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00991 153 225 Carbohydrate Esterase AT3G14320 31.507 1.83e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00991 - K11982 mtr:MTR_5g006240 206.453