Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00989 ATGGTTaaagcagagaagaaaatcaacaaagaaaaatcaaagccaatgcaaaaccaaCCTTTATCTATATCTTCATCAGAAATTTCAGCATCAAATGAGAAGAAGAAAAAGTACAAAGGAGTGAGAATGAGGAGTTGGGGTTCTTGGGTATCAGAAATTAGAGCACCAAATCAAAAAACAAGAATATGGTTAGGTTCATATTCAACTGCTGAAGCTGCAGCTAGAGCCTATGATGCTGCACTTTTATGCCTTAAAGGTTCTTCAGCAAATTTTAATTTCCCTTTAAACAAAAATTCTTCACATAATTTCATTCCTCAACAAAACAACAACAATAATAATGTTGTTATGTCACCTAAATCAATCCAAAGAGTAgctgctgctgctgcagctgctAATAATATTAATGATATTGCTATTAACACCCCACCTTCTTCTAATCCTGTTTCAACAACAACAACTTCATCTTCATTGGTTTCATCTCCATCAATGTCAACATCTTCTCCAAATTCTGATCAAATTCATGATAATGATGATGTTTCACTTTTTTCATCTTTTGGGGCCTACACTAGTTGTGATCATCAAGCAAATGAATCAATGGCTATGATGGATTCTTGGTATGGATTTGATGGTTTACAATCACCAAAACATGTTAATGATCATATGCTACTAAGTGAGGCTTTGTTTGATATTGATTCAACTCAAGTGCTTCTTGATGATTGGTATGAAGAAGGTGACATTAGTTTGTGGAGCTTCTACTAA 759 0.3043 MVKAEKKINKEKSKPMQNQPLSISSSEISASNEKKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGSSANFNFPLNKNSSHNFIPQQNNNNNNVVMSPKSIQRVAAAAAAANNINDIAINTPPSSNPVSTTTTSSSLVSSPSMSTSSPNSDQIHDNDDVSLFSSFGAYTSCDHQANESMAMMDSWYGFDGLQSPKHVNDHMLLSEALFDIDSTQVLLDDWYEEGDISLWSFY 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00989 252 MobiDBLite consensus disorder prediction 14 29 - -
Car02g00989 252 CDD AP2 36 94 IPR001471 GO:0003700|GO:0006355
Car02g00989 252 ProSiteProfiles AP2/ERF domain profile. 37 94 IPR001471 GO:0003700|GO:0006355
Car02g00989 252 SUPERFAMILY DNA-binding domain 37 95 IPR016177 GO:0003677
Car02g00989 252 MobiDBLite consensus disorder prediction 1 37 - -
Car02g00989 252 PRINTS Ethylene responsive element binding protein signature 38 49 IPR001471 GO:0003700|GO:0006355
Car02g00989 252 PRINTS Ethylene responsive element binding protein signature 60 76 IPR001471 GO:0003700|GO:0006355
Car02g00989 252 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 13 251 - -
Car02g00989 252 MobiDBLite consensus disorder prediction 138 173 - -
Car02g00989 252 Gene3D AP2/ERF domain 36 96 IPR036955 GO:0003700|GO:0006355
Car02g00989 252 SMART rav1_2 37 100 IPR001471 GO:0003700|GO:0006355
Car02g00989 252 Pfam AP2 domain 37 86 IPR001471 GO:0003700|GO:0006355
Car02g00989 252 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF014 13 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00989 Car-Chr2 18353141 18354335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00989 38 251 AP2-EREBP Transcription Factor Family AT1G21910 47.111 2.88e-45 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Car02g00989 AP2 5.5e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00989 - - mtr:MTR_5g058470 258.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00989 02 18353141 18354335 Car02g00989 02 18353141 18354335 ECH