Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00983 atgaacatgaacatggaaactgacttggacatggtcatggaTGGAGTCCCCAATATCCTGGAACTCTCTAATTACAGTTACAGTACAACAACCACGCATACATCTGATGACGAAGCCACATGGAACAACAACTTGTCCCCACTCATCGACTTAGATTTCTTCACTGCCGATCAAGATCACTTCCATGACTTCATTCATTCCCTCACCAACGATGGAATCACAGCCGTTGATTCAAATCTAGTTAATACTATCACAGACCAAGAAGAAGAAGAATCCATTGGCTATGAGTCCAACTCCAATTCCTCAACCGAAGAAGACCACGACAGAAAGGGCCTCCGTCTAGTGCACCTGCTTATGGCGGCGGCGGAGGCCCTGACAGGCACCAACAAGAGCCATGATTTGGCTCGAGTAATATTGATTCGGCTCAAAGAATTAGTTTCCCCCACTCACGGCACCAACATGGAGAGACTCGCGGCGTATTTTACCGACGCCCTCCAAACTCTACTAAACGGCACCAACTGTGCGCACTCCACCAATCACCATAAGCTTTGCGTTCTCTCTGGACCCCACCAAAACGACATACTCTATGCGTTTCAGCTTCTTCAAGACATGTCTCCCTATGTAAAGTTCGCGCACTTCACAGCCAACCAAGCTATCCTCGAAGCTGTGGTCCATGAACGAAGAGTTCACATCGTGGACTATGACGTCATGGAAGGGGCCCAATGGGCTTCACTTATTCAATCATTTTCATCACGAAAGGACGGCCTTCCAGGCCCACATCTTCGCATCACTGCATTGTCTAGAAACAGCGGACGTGGCAGTGGGCAGAGATCCATTGCCACTGTTCAAGAAACTGGACGACGGTTAACGGCGTTTGCTACTTCTGTTGGTCAACCGTTTACTTTTCATCAATGTAAGTTGGATTCGGAAGAAACATTTCGAACGTCTTCGCTGAAGCTTGTTCGCGGTGAGGCGTTGATGTTTAATTGTGTGATGCATTTGCCTCATCTCAGTTACCGCTCATCAGATTCGATTTCTTCGTTTTTTAATGGTGCTAAGGAGTTAAGACCAAAGCTTGTGACATTAGTTGAGGAGGAGGTGGGGCCCCTTGATGATGCTGGCTTTGTGGGCCTGTTCATGGATTCGCTTCACCGTTACTCGGCGATGTATGATTCACTTGAGGATGGGTTTCCTATGAATAAATGGTCCAGGAGTTTGGTGGAGCGAGTGTTTTTGGGCCCATTAATAACGGGCTCAGTGGCCCGATTGTACATTACCGGTGAAGTGGAGGAACAAGAGAGGAGTTCTTGGGGGGAGTGGTTGAGTGCGTCGGGGTTCAAGGGTGTTGCTTTAAGCTACGGTAACTATTGCCAAGCGAAGTTGTTACTTGGTCTTTTTAATGATGGGTATAGAGTGGAGGAGGTGGATAACAATAAGTTGGTGTTGGGTTGGAAATCAAGGCATTTGCTTTCAACTTCTATTTGGAGTTTTATGTTAGAGTGA 1503 0.4597 MNMNMETDLDMVMDGVPNILELSNYSYSTTTTHTSDDEATWNNNLSPLIDLDFFTADQDHFHDFIHSLTNDGITAVDSNLVNTITDQEEEESIGYESNSNSSTEEDHDRKGLRLVHLLMAAAEALTGTNKSHDLARVILIRLKELVSPTHGTNMERLAAYFTDALQTLLNGTNCAHSTNHHKLCVLSGPHQNDILYAFQLLQDMSPYVKFAHFTANQAILEAVVHERRVHIVDYDVMEGAQWASLIQSFSSRKDGLPGPHLRITALSRNSGRGSGQRSIATVQETGRRLTAFATSVGQPFTFHQCKLDSEETFRTSSLKLVRGEALMFNCVMHLPHLSYRSSDSISSFFNGAKELRPKLVTLVEEEVGPLDDAGFVGLFMDSLHRYSAMYDSLEDGFPMNKWSRSLVERVFLGPLITGSVARLYITGEVEEQERSSWGEWLSASGFKGVALSYGNYCQAKLLLGLFNDGYRVEEVDNNKLVLGWKSRHLLSTSIWSFMLE 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00983 500 Pfam GRAS domain family 114 495 IPR005202 -
Car02g00983 500 MobiDBLite consensus disorder prediction 87 107 - -
Car02g00983 500 ProSiteProfiles GRAS family profile. 105 496 IPR005202 -
Car02g00983 500 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 10 496 IPR005202 -
Car02g00983 500 PANTHER SCARECROW-LIKE PROTEIN 26 10 496 IPR030028 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00983 Car-Chr2 17930566 17932657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00983 73 496 GRAS Transcription Factor Family AT3G54220 34.642 1.21e-54 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Car02g00983 GRAS 1.5e-97 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00983 - - cit:102620887 570.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00983 02 17930566 17932657 Car02g00983 02 17930566 17932657 ECH