Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00975 atgacttacaGATGTTGTGGTTATCTTAATTTCAGTAACCCTCAGGATGCGGCTAGGGCATTGGATATGCTGAATTTTACTCCACTAAACATCAAATCTATTAGGGTTATTATTCTCATCGGGATCCTAGTATTAGGAAGAATGTCTCATGGTTTTGTTCAATTTGACATTGAGGAATCTGCTCAGAATGCAATTGATAAGTTAAATGGTTCTGGTCAGTCTAATGGTTATGGTTTTGTTCAATTTAATAATGTTTATGTGAGAAAACATATCTTAGTGGATGAGTTGAGAAAGGTATTTGGAGAATATGGCACCATTACTAATGCTGTTTTGATGAGAGATGCAGATGCAGATGTTGCTAATGCTGTGGAGGCATTGAATGGGTGTCCTGATTATGATTCTGGGAATGGTGGTCCCACAGATTGTGGTGTCCTTGGGAAGTGGACAGTGGGATCAGATTTTTGGTGGAGAAAACTCTCCAGCCTTTGTTGTGGCAGCTATTGCAACCCTTATGAGTGGGCTCTTAGCTGA 531 0.3917 MTYRCCGYLNFSNPQDAARALDMLNFTPLNIKSIRVIILIGILVLGRMSHGFVQFDIEESAQNAIDKLNGSGQSNGYGFVQFNNVYVRKHILVDELRKVFGEYGTITNAVLMRDADADVANAVEALNGCPDYDSGNGGPTDCGVLGKWTVGSDFWWRKLSSLCCGSYCNPYEWALS 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00975 176 PANTHER POLYADENYLATE-BINDING PROTEIN 50 70 - -
Car02g00975 176 PANTHER POLYADENYLATE-BINDING PROTEIN 83 117 - -
Car02g00975 176 PANTHER POLYADENYLATE-BINDING PROTEIN 7 37 - -
Car02g00975 176 SUPERFAMILY RNA-binding domain, RBD 3 73 IPR035979 GO:0003676
Car02g00975 176 PANTHER RNA BINDING PROTEIN 50 70 - -
Car02g00975 176 PANTHER RNA BINDING PROTEIN 83 117 - -
Car02g00975 176 PANTHER RNA BINDING PROTEIN 7 37 - -
Car02g00975 176 SUPERFAMILY RNA-binding domain, RBD 93 129 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00975 Car-Chr2 17409560 17410212 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00975 7 128 Eukaryotic Initiation Factors Gene Family AT1G22760 33.000 1.03e-21 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00975 K13126 - gmx:100784442 96.2857