Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00971 ATGGCAAAGAGGATGAAAAGATCAGGTGTCAAGAAGCAAATGAGTCCCGTGAAAATAGGTTTAACTTTTGTGAACAAGTTGAAGGCTCGATTTCGATATAGCCCTCATGTTTACGTGTTGTTTCTAGACATACTAAATAAGTATATAACCGGAGAGAAATCTGTTGACGAGGTCTTCCATGAGGTCACTACATTGATCAAAGATCACCCTGATCTTGTTGATGGGTTTCTTTATTCTTTTCCAATAGGAGGTGGTGTGTGA 261 0.3908 MAKRMKRSGVKKQMSPVKIGLTFVNKLKARFRYSPHVYVLFLDILNKYITGEKSVDEVFHEVTTLIKDHPDLVDGFLYSFPIGGGV 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00971 86 Gene3D Paired amphipathic helix 20 81 IPR036600 GO:0006355
Car02g00971 86 PANTHER SIN3B-RELATED 21 79 IPR039774 GO:0003714
Car02g00971 86 ProSiteProfiles PAH domain profile. 10 83 IPR003822 GO:0006355
Car02g00971 86 SUPERFAMILY PAH2 domain 21 78 IPR036600 GO:0006355
Car02g00971 86 Pfam Paired amphipathic helix repeat 37 76 IPR003822 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00971 Car-Chr2 17040471 17041841 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Car02g00971 PAH 1.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00971 K11644 - smo:SELMODRAFT_440352 74.3294