Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00963 ATGGTGATGTTATCCTCGATGTTTCTTTGTTGGTGTTCTAAAACTTCATCGAATAAGTATGTGGCAACTGAGCTGACATCTGACATAGTCATTAATGTCGGGGATGTAAAATTTTATCTGCATAAGTTTCCACTTTTGTCGAAAAGTTTACGCTTGCAGTTGGTTTCGAACACAAGCGAGGAGAACGATGAAGTTCATATCCACGACATTCCCGGAGGACCCGTTGCTTTTGAAATATGTGCCAAGTTCTGTTATGGTATGGTGGTCACTCTAAATGCATACAATGTGGTTGCAGCTCACTGTGCAGTAGAGTATCTTGAGATGTACGAAACTGTTGAAAAGGGAAATCTTTTCTTCAAGATTGAAGTTTTCCTCAACTCCAACATTTTCAGGAGCTGGAAAGACTCGATTATCGTTCTACAAACAACCAAATCTCTTCTTCCATTGTCAGATGAGCTTAAGGTGGTGAGCCATTGTATTGAATCCATAGCTACCAAGGCTTCGATGGATACATCGAGGGTGGAGTGGTCATACACATATAACAGGAAAAAAACTCCCATCTGA 564 0.406 MVMLSSMFLCWCSKTSSNKYVATELTSDIVINVGDVKFYLHKFPLLSKSLRLQLVSNTSEENDEVHIHDIPGGPVAFEICAKFCYGMVVTLNAYNVVAAHCAVEYLEMYETVEKGNLFFKIEVFLNSNIFRSWKDSIIVLQTTKSLLPLSDELKVVSHCIESIATKASMDTSRVEWSYTYNRKKTPI 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00963 187 PANTHER OS12G0117600 PROTEIN 16 182 IPR043454 -
Car02g00963 187 SUPERFAMILY POZ domain 17 113 IPR011333 -
Car02g00963 187 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY5 16 182 - -
Car02g00963 187 Gene3D Potassium Channel Kv1.1; Chain A 14 116 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00963 Car-Chr2 16654017 16656517 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00963 14 176 EF-hand Containing Proteins AT3G44820 35.714 6.27e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Car02g00963 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00963 - - aprc:113868844 293.123