Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00954 ATGTCAGCGGCGTCGCCGTCTCCGGCAACCTCCAACGTCGCGCCACTTTCTAATACAGCTCCACCGCCGTCTTCATCAACTTCTCCTCCACCGAAGTCCTCATCCACTGCTCCTCCACCGGAACAACCCTCCTCTCCTTCACCTCCTCCAGAAACATCACCACCTCCGGCAACCCAAACTGCTCCTCCTCCTCCCACCTTGCCGTCGcctccaccaccttcaccatcacctccgtcgccacctccgccttcaccatcacctccgtcgccacctcctccaacctcgccgtctcgtcctcccccatcgccaccaccatcttctccacctcgtccctcaccgccaccgcaatcgcctgttccgccaaaaagccctcctccaccttcaccaccactagcaccgtcagctccaccgccgtcgaagccatctcctccaccggataattcaccccctcctgccaccgtgacaccaccccgacgttcaccaccaccaccccctaaaaaccgaactccaccaccagcatcaccgcctaagttaccaccgccaccatcacaaccatcacaaccaccatcatcaccaccattaccattaccatcaccaccaccaacaccaTTTCCTCCTCCTGCTACACCTAGTTCACAATCACTTCCACCTTCAAATTCAACGCCAAGACTACTTCCTCCATCACCCTCAATCATTCGATTGTCGCCTCCTCCGCCGCCGCCATCGCAGAATGGATCAGAAAATTCAACCCCTGAAATTGGAAGCAGTGGTGGAATTGGTTCTGGTGCTGTAGTAGCTATTGCTGCTGTGTTTGGTGGAATTCTATTGCTTGGCTTCATTGGAGTTGCTATATGGTGCTTGAGGAGAAAAAAGAAAAAAGATCCTCCTAATGATGGTTATGTTATGCCTTTCACTCTTCCCTCCTCAACTGAATCAGATTCATCCTTTTTTAAGATACATGCTGCCTCTGCTCCTCTTGTAAGTAGTGGCTCTAACAGTGATGTTGTGCATACACCATCTGACCCTGGTGGTGGAATGGGCCACTCAAGGAATTGGTTTTCATATGAAGAACTATTCAAGGCCACAAATGGTTTCTCAACTCTGAATCTTTTGGGAGAGGGTGGATTTGGTTTTGTATATAAAGGATGTTTACCTGATGGGAGAGAGATAGCAGTGAAACAGCTCAAAATTGGTGGAAGTCAAGGGGAAAGAGAATTCAAAGCTGAAGTCGAAATTATTAGTCGCATACATCATCGCCATTTGGTTTCTTTAGTTGGATACTGCATTCAAGATGACAGAAAACTACTTGTCTATGATTATGTCCCTAACAATACCCTTCATTTTCATCTACATGGGGAAGGTCAACCTGTGCTGGAATGGCAAAATCGTATTAAAATTGTAGCTGGTGCGGCTCGAGGAATAGCTTATCTACATGAAGACTGCAATCCTCGGATTATTCACAGAGATATTAAGCCGTCAAACATTCTTTTGGATTTCAACTATGAAGCTCGTGTCTCAGATTTCGGCCTAGCCAAATTAGCTCTGGATGCAAATACACATATAACCACGCGTGTCATGGGAACTTTTGGGTATGTTGCTCCTGAATATGTGTCAAGTGGAAAATTGACTGACAAGTCTGATGTATATTCTTTTGGAGTTGTGCTTTTGGAGCTCATTACCGGACGGATGCCTGTAGATCCATCCCAACTGGGAGATCAGAGTCTAGTTGAATGGGCTCGACCTTTGCTAAGTGATGCACTTGAAACTGAGGAATTTGATAGTTTGGTAGATCCAAAGCTAGGAAAGAACTACGTTGATAGCGAAATGTTTTGCATGATTGAAGTTGCTGCTGCTTGTGTTCGACATTCAGCTGCTAAGAGACCTCGCATGGGACAGGTTGTTAGAGCTTTTGAAAGCTTAGCAACTTCAGATCTAACCAACGGAATGCGAGTCGGGCAAAGTCAGGCATTTGACTCTGCACAGCAATCTGAAGAAATAAGATTGTTTCAGAGGATGGCATTTGGTAGTCAAAACTATAGCTCAGATTTTTTTAATCACTCTAGTTTGCATATGTAA 2076 0.3579 MSAASPSPATSNVAPLSNTAPPPSSSTSPPPKSSSTAPPPEQPSSPSPPPETSPPPATQTAPPPPTLPSPPPPSPSPPSPPPPSPSPPSPPPPTSPSRPPPSPPPSSPPRPSPPPQSPVPPKSPPPPSPPLAPSAPPPSKPSPPPDNSPPPATVTPPRRSPPPPPKNRTPPPASPPKLPPPPSQPSQPPSSPPLPLPSPPPTPFPPPATPSSQSLPPSNSTPRLLPPSPSIIRLSPPPPPPSQNGSENSTPEIGSSGGIGSGAVVAIAAVFGGILLLGFIGVAIWCLRRKKKKDPPNDGYVMPFTLPSSTESDSSFFKIHAASAPLVSSGSNSDVVHTPSDPGGGMGHSRNWFSYEELFKATNGFSTLNLLGEGGFGFVYKGCLPDGREIAVKQLKIGGSQGEREFKAEVEIISRIHHRHLVSLVGYCIQDDRKLLVYDYVPNNTLHFHLHGEGQPVLEWQNRIKIVAGAARGIAYLHEDCNPRIIHRDIKPSNILLDFNYEARVSDFGLAKLALDANTHITTRVMGTFGYVAPEYVSSGKLTDKSDVYSFGVVLLELITGRMPVDPSQLGDQSLVEWARPLLSDALETEEFDSLVDPKLGKNYVDSEMFCMIEVAAACVRHSAAKRPRMGQVVRAFESLATSDLTNGMRVGQSQAFDSAQQSEEIRLFQRMAFGSQNYSSDFFNHSSLHM 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00954 691 MobiDBLite consensus disorder prediction 220 245 - -
Car02g00954 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 485 497 IPR008271 GO:0004672|GO:0006468
Car02g00954 691 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 63 686 - -
Car02g00954 691 SUPERFAMILY Protein kinase-like (PK-like) 348 636 IPR011009 -
Car02g00954 691 MobiDBLite consensus disorder prediction 22 213 - -
Car02g00954 691 PANTHER BNACNNG34790D PROTEIN 63 686 - -
Car02g00954 691 CDD STKc_IRAK 371 640 - -
Car02g00954 691 PRINTS Pistil-specific extensin-like signature 74 97 IPR003882 -
Car02g00954 691 PRINTS Pistil-specific extensin-like signature 108 126 IPR003882 -
Car02g00954 691 ProSiteProfiles Protein kinase domain profile. 365 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00954 691 SMART serkin_6 365 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00954 691 ProSitePatterns Protein kinases ATP-binding region signature. 371 393 IPR017441 GO:0005524
Car02g00954 691 MobiDBLite consensus disorder prediction 1 21 - -
Car02g00954 691 Gene3D Transferase(Phosphotransferase) domain 1 441 660 - -
Car02g00954 691 Pfam Protein kinase domain 366 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00954 691 Gene3D Phosphorylase Kinase; domain 1 344 440 - -
Car02g00954 691 MobiDBLite consensus disorder prediction 1 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00954 Car-Chr2 16415800 16421791 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00954 141 683 Trihelix Transcription Factor Family AT1G70460 49.126 1.61e-160 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Car02g00954 Pkinase 3.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00954 - - mtr:MTR_0194s0030 780.015