Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car02g00949 | ATGATGAGTCCTCTAATAAGAATCGCGTTAGCAATAAACTTATTGTCTAATTCCCATACCATAAGAATACTCATCAAATACTCTGTTCGCCTTCAAATTCTTCTCAATTGGACATTCAATTTCTTTTCCCTCTATTTGTGTTATCCTTTGTGCAAGCGACAACGTTATGATCAGCAAACTGTATGTAAATATGTGTCCCAACCACAAGAAGATGTAGATTGTGCTGTGTGTCTCTGTAACATGAAAGAAAAGGATGAGATTAGAGTGCTATTGTGTAAACATGTTTTTCATAGAGATTGTTTGGATACTTGGCTTAGATTCAACTTCAACAAAATGAGTTGCCCTCTTTGCAGAATTGCAGTAGGTCCAATAAAAGATGTTGATGCTCAAGTTCTACCTAGCGATTACCGGATACCGTGGTTGCGTTAA | 429 | 0.3683 | MMSPLIRIALAINLLSNSHTIRILIKYSVRLQILLNWTFNFFSLYLCYPLCKRQRYDQQTVCKYVSQPQEDVDCAVCLCNMKEKDEIRVLLCKHVFHRDCLDTWLRFNFNKMSCPLCRIAVGPIKDVDAQVLPSDYRIPWLR | 142 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car02g00949 | 142 | SUPERFAMILY | RING/U-box | 67 | 124 | - | - | |
Car02g00949 | 142 | Pfam | Ring finger domain | 73 | 118 | IPR001841 | - | |
Car02g00949 | 142 | ProSiteProfiles | Zinc finger RING-type profile. | 74 | 118 | IPR001841 | - | |
Car02g00949 | 142 | SMART | ring_2 | 74 | 117 | IPR001841 | - | |
Car02g00949 | 142 | PANTHER | RING ZINC FINGER PROTEIN-RELATED | 52 | 122 | - | - | |
Car02g00949 | 142 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 54 | 124 | IPR013083 | - | |
Car02g00949 | 142 | PANTHER | EMB|CAB89405.1-RELATED | 52 | 122 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Car02g00949 | Car-Chr2 | 16259212 | 16259836 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Car02g00949 | 73 | 121 | C3H Transcription Factor Family | AT1G15100 | 56.000 | 4.46e-13 | 60.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car02g00949 | - | K16282 | mtr:MTR_4g077570 | 119.012 |