Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00936 ATGAAGATCATCGCGGCGTATTTGCTGGCCGTTTTGGGCGGTAAAGCAGCCCCTACCTCTGATGATATCAAACACATCCTCACTTCAGTTGGAATTGAGGCCGAGGATGAGAAGATTGAGTTGCTCTTGGGTGAAGTCAAGGGAAAAGATTTTGCCGAGCTAATTGCTAGTGGAAGAGAAAAGTTGTCTTCAGTGCCATCTGGTGGAGGtgctgttgctgtttctgctgcacctggtggaggtgctgcagcagctgctgcacctgctgctgAAGCCAAGgaagaaaagaaggttgaagaaaaagaagaaTCTGATGATGACATGGGCTTCAGTTTGTTCGACTAA 345 0.3449 MKIIAAYLLAVLGGKAAPTSDDIKHILTSVGIEAEDEKIELLLGEVKGKDFAELIASGREKLSSVPSGGGAVAVSAAPGGGAAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00936 114 MobiDBLite consensus disorder prediction 90 104 - -
Car02g00936 114 Pfam 60s Acidic ribosomal protein 18 113 - -
Car02g00936 114 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 114 IPR044076 GO:0002182|GO:0003735|GO:0022625
Car02g00936 114 CDD Ribosomal_P2 1 114 IPR044076 GO:0002182|GO:0003735|GO:0022625
Car02g00936 114 MobiDBLite consensus disorder prediction 84 114 - -
Car02g00936 114 Hamap 50S ribosomal protein L12 [rpl12]. 2 114 IPR027534 GO:0003735|GO:0005840|GO:0006414
Car02g00936 114 Gene3D - 1 59 IPR038716 -
Car02g00936 114 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2-1 1 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00936 Car-Chr2 15724598 15726091 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00936 1 70 Cytoplasmic Ribosomal Protein Gene Family AT2G27710 78.571 7.32e-32 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00936 K02943 - nnu:104588014 121.709