Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00930 ATGGCAAACGATTCTTCTAGTTCTGATTCCCATCATAAACGTCTTGGTCTTTTAAAAGATCAAGTCCATTTGGTTAAAAGGAAAGACTCTAATCGCCATGAGATTGCTCCTATACAAGATCAACTATCATTTGAGAAGGGTTTTTTCATAGTAATTCGTGCATGCCAATTGTTAGCCCAAAAGAATGATGGAATAATATTGGTTGGGGTGGCGGGTCCTTCAGGAGCAGGGAAGACTATATTCACAGAAAAGATACTCAACTTCATGCCCAGCATTGCTGTAATTTCAATGGATAATTACAATGATGCTAGTCGAATTGTTGACGGAAATTTTGATGATCCACGCTTAACTGACTATGACACATTGCTCCAGAATTTACAAGATTTAAAGGAAGGAAAGACAGTTGAGGTTCCAATATATGATTTCAAGTCTAGTTCACGTATAGGATACAGGACTGTAGAATCCCCAAGTTCCCGAATTGTGATTATAGAGGGTATCTATGCCTTGAGTGAGAAGTTGCGAAGTTTGCTGGACCTTCGAGTTTCTGTTACAGGTGGAGTTCACCTTGACCTTGTAAAGCGAGTTATACGTGACATACAACGTGCTGGCCAAGAGCCTGAAGAAATCATTCATCAAATATCTGAGACGGTATATCCAATGTATAAGGCTTTTATTGAGCCAGATCTCAAGACAGCACATATAAAAATTATCAACAAATTTAATCCATTTACTGGATTCCAGAGCCCTACTTACATATTAAAGTCAGCAAGGAACGTAGCAGttgatcaaattaaagctgttctcgctgaagattttgtggaaaCAAAAGAGCAAACTTATGACATATATCTTTTACCTCCCGGTGAAGATCCAGAAACTTGCCAATCATATTTAAGGATGCGAAACAAGGATGGGAAATACAGTCTCATGTTTGAGGAATGGGTGACAGATAATCCCTTTGTCATATCACCACGGATTACTTTTGAGGTCAGTGTGCGCCTTCTTGGTGGACTAATGGCCTTGGGATACACAATAGCTACTATCCTTAAGAGAAACAGCCATGTCTTTTCTGATGATAGGGTTTGTGTGAAACTAGATTGGCTTGAGCAACTCAATCGACATTATGTTCAGGTACAAGGGAGAGATCGCTTAGTTTTGAAAAACATAGGAGATGAGCTGGGTCTTGAAGGTTCCTACATTCCTCGTACCTACATTGAGCAAATTCAACTTGAAAGGCTTGTGAATGAGGTTATGGCCCTTCCAGATGATTTGAAGACAAAGCTTAGCCTAGATGAGGATTTGGTTTCAAGTCCCAAAGAAGCACTTTCTAGGGCCTCTGCTGACAGGGTTGCCATGAGAAATAAGAATATGAGAAGTGGAATGTCACAGTCATATACGAATCCACGGGACAAAAATACAGCTAAAGCTGCTGGATATTTTTCCAAAAATCGAGGGTTTGATGAAAGAAATTCAGATTCCGCCACAGCACAAGTAAATCAGGGAGTTATTAGTCAGCTTTCAGAACAGATTTCAGCCCTCAATGATAGAATGGATGAATTTACAAGTTGTATTGAAGAGCTTAACTGCAAGCTAACGATCAAGAATAATTCTCGAAGCCAACAAAATATATCAGGTCAAGCTGAAGCCTGCAATGGTTCTGCTCCCACGTCTTACTTCATCAATAGTTTGGGTAATGGTAGCATAACTGGATCTAAGTTACCAAATTCATCATCTTCATCACAATTAAATAAGGATTCTCCCTTAATGGAAGAGATATCAGGAATTGCACGTGGCCAGCGTCAGATCATGCATCAAATGGACAATCTCAATAATCTTCTTCGCAGTAGCTTAGGTGAAAGGTCTCAGCAAACAAGAACTAACAAGAGAAGCATAACTACAGATTCAAATTCCATTGGAACCAGTGTTATAGTGGTAGTAGCAGTTGGTTGTTTGGGGATCTTCTTGATGAAAGGTTTTATGACCCAGAAGTGA 1992 0.3886 MANDSSSSDSHHKRLGLLKDQVHLVKRKDSNRHEIAPIQDQLSFEKGFFIVIRACQLLAQKNDGIILVGVAGPSGAGKTIFTEKILNFMPSIAVISMDNYNDASRIVDGNFDDPRLTDYDTLLQNLQDLKEGKTVEVPIYDFKSSSRIGYRTVESPSSRIVIIEGIYALSEKLRSLLDLRVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLKTAHIKIINKFNPFTGFQSPTYILKSARNVAVDQIKAVLAEDFVETKEQTYDIYLLPPGEDPETCQSYLRMRNKDGKYSLMFEEWVTDNPFVISPRITFEVSVRLLGGLMALGYTIATILKRNSHVFSDDRVCVKLDWLEQLNRHYVQVQGRDRLVLKNIGDELGLEGSYIPRTYIEQIQLERLVNEVMALPDDLKTKLSLDEDLVSSPKEALSRASADRVAMRNKNMRSGMSQSYTNPRDKNTAKAAGYFSKNRGFDERNSDSATAQVNQGVISQLSEQISALNDRMDEFTSCIEELNCKLTIKNNSRSQQNISGQAEACNGSAPTSYFINSLGNGSITGSKLPNSSSSSQLNKDSPLMEEISGIARGQRQIMHQMDNLNNLLRSSLGERSQQTRTNKRSITTDSNSIGTSVIVVVAVGCLGIFLMKGFMTQK 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00930 663 Pfam Phosphoribulokinase / Uridine kinase family 68 236 IPR006083 GO:0005524|GO:0016301
Car02g00930 663 Pfam CYTH domain 269 404 IPR023577 -
Car02g00930 663 Gene3D - 66 248 IPR027417 -
Car02g00930 663 Gene3D - 254 412 - -
Car02g00930 663 ProSiteProfiles CYTH domain profile. 248 410 IPR023577 -
Car02g00930 663 PANTHER PHOSPHORIBULOKINASE/URIDINE KINASE-LIKE PROTEIN 5 654 - -
Car02g00930 663 CDD UMPK_like 67 239 - -
Car02g00930 663 SUPERFAMILY CYTH-like phosphatases 262 407 IPR033469 -
Car02g00930 663 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 236 IPR027417 -
Car02g00930 663 PANTHER URIDINE KINASE 5 654 - -
Car02g00930 663 PRINTS Uridine kinase signature 65 82 - -
Car02g00930 663 PRINTS Uridine kinase signature 132 147 - -
Car02g00930 663 PRINTS Uridine kinase signature 188 198 - -
Car02g00930 663 PRINTS Uridine kinase signature 224 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00930 Car-Chr2 15370484 15380356 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00930 66 365 PRT Gene Family AT5G40870 25.321 3.47e-18 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00930 K00876 - gmx:100797542 1127.85