Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00927 ATGGAAGATGTGATCACAGAAGCAGCACCTCCTTCAAGATTATTAGAAGAAGACCTCAACAATTTCACACCACCCTCTCCCCTTCTTCCTTCACCCTTCCTCCTCTTTTCTCACTCTCAACAACCTCTCAAACCAtctctcctcattattgctatctcttctccctctctctccctctTCAACAACAACTTCAACCCTAAAACCCTAATCGCCTCTCTCATCCTCCCAGAActccctctctccctccctaacaacactctcgacatccactccctctcctccACCGTTCTCATCGCCGCCGTCCGATGCTCTATCCCCGCCGACCGCGCTTACGCCGTCGCAAATGTCCTCCTAAGCGACCGGATCCGGCCTGATTCGGTTATCATTTTAGACTCTCTACAGCCAATGAATCACCGCGGTCTGCTCTCGTCGGACCGTGCTGTTGCTTTCAAGCTGGAGAGCTTAGCGGAAAGGAAGAGGGCGGATGGGGAGAAGAAGTTGTTGGATGGATTGGAGTATTACCCATCCGGCAGCGTTGTTGATGGACTTGGCGCCGCGATTCTCGGACGGTGCCAGGTTTTGAACATTAGGGCTAGCTTGTGTGTTTCCTGGCCTCAATTTGATGGCTCTGTTGTGTTGTTGTTAAAGGATTTGCTTCGACGTTGTGCTTTGCCGGAGTTCGACTTCGCTTATTACTATAATACACTAACAATGGATTGTTCATTTCTTTTGAAATTCTTCTTTTTACATATTGTTCTTTTGTTTGGATTTCTTGGTGACAACATAATGTATGCAAGTGAGCCTCAATTAACACTTGATTACTATGCATCAACTTGTCCTACTGTGTTTGATATTGTTAGGAAGGAAATGGAATGTTCAGTTCTTTCTGATCCTCGTAATGCCGCCTCGATTGTTCGGCTTCACTTCCATGATTGCTTTATTCAGGGATGTGATGGATCGATCTTGCTCGACGATACAATCACACTTAAAGGTGAAAAGAAAGCAGCTACCAACATCCATTCTTTAAAAGGCTTCGGAGTTATCGATCAAATCAAGAACTTTGTTGAATCAGAGTGCCCTGGGATTGTTTCTTGTGCTGATATTCTCACAATTGCAGCTAGAGATGCTGTGATTCTGGTTGGTGGACCATATTGGGATGTTCCTGTTGGAAGGAAGGATTCTGTGACTGCAAGTTTTGAACTTGCTAACACTAATCTTCCAACTCCTGATGAGAGCCTTGTCTCTATCATTCCTAAGTTTCTTTATCAAGGCCTATCAGTCACTGATATGGTTGCCCTTGTTGGAGCCCACACAATTGGCATGGCAAAGTGTGAGAATTTTCGATCCAGAATATATGGAGACTATGGATCAACTTTAGTGAAAAATCCAATCTCAGATAATCAGTTCAACAACCTTAAATCTATTTGTCCAGCAACTGGAGGAGGAGACAATAACATAACAGCAATGGACTATGTGACGCCTAATCTCTTTGACAATTCTTTCTACCACTTACTATTAAATGGAGAGGGAGTTCTTAACTCGGATCAAGAAATGTACTCGAGTGTTTTTGGAATCGAAACAAGAGAGCTTGTCAAGAAATATGCAGCAGACCCTTTGGCTTTCTTCCACCAATTCTCTGATTCAATGGTGAAAATGGGAAATATAACAAATTCTGAAAGCTTTGTCACAGCAGAAGTTAGGAAAAACTGCAGATTTGTGAACACATAA 1728 0.4074 MEDVITEAAPPSRLLEEDLNNFTPPSPLLPSPFLLFSHSQQPLKPSLLIIAISSPSLSLFNNNFNPKTLIASLILPELPLSLPNNTLDIHSLSSTVLIAAVRCSIPADRAYAVANVLLSDRIRPDSVIILDSLQPMNHRGLLSSDRAVAFKLESLAERKRADGEKKLLDGLEYYPSGSVVDGLGAAILGRCQVLNIRASLCVSWPQFDGSVVLLLKDLLRRCALPEFDFAYYYNTLTMDCSFLLKFFFLHIVLLFGFLGDNIMYASEPQLTLDYYASTCPTVFDIVRKEMECSVLSDPRNAASIVRLHFHDCFIQGCDGSILLDDTITLKGEKKAATNIHSLKGFGVIDQIKNFVESECPGIVSCADILTIAARDAVILVGGPYWDVPVGRKDSVTASFELANTNLPTPDESLVSIIPKFLYQGLSVTDMVALVGAHTIGMAKCENFRSRIYGDYGSTLVKNPISDNQFNNLKSICPATGGGDNNITAMDYVTPNLFDNSFYHLLLNGEGVLNSDQEMYSSVFGIETRELVKKYAADPLAFFHQFSDSMVKMGNITNSESFVTAEVRKNCRFVNT 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00927 575 ProSitePatterns Peroxidases active site signature. 301 312 IPR019794 GO:0004601
Car02g00927 575 Pfam Peroxidase 286 537 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car02g00927 575 ProSitePatterns Peroxidases proximal heme-ligand signature. 429 439 IPR019793 -
Car02g00927 575 Gene3D Peroxidase, domain 2 407 552 - -
Car02g00927 575 ProSiteProfiles Plant heme peroxidase family profile. 269 574 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car02g00927 575 PRINTS Haem peroxidase superfamily signature 301 315 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car02g00927 575 PRINTS Haem peroxidase superfamily signature 381 393 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car02g00927 575 PRINTS Haem peroxidase superfamily signature 363 380 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car02g00927 575 PRINTS Haem peroxidase superfamily signature 490 505 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car02g00927 575 PRINTS Haem peroxidase superfamily signature 429 444 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car02g00927 575 CDD secretory_peroxidase 269 573 IPR033905 GO:0004601|GO:0042744
Car02g00927 575 PANTHER PEROXIDASE 11 259 573 - -
Car02g00927 575 Gene3D - 274 574 - -
Car02g00927 575 PRINTS Plant peroxidase signature 381 396 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car02g00927 575 PRINTS Plant peroxidase signature 428 440 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car02g00927 575 PRINTS Plant peroxidase signature 504 521 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car02g00927 575 PRINTS Plant peroxidase signature 279 298 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car02g00927 575 PRINTS Plant peroxidase signature 547 560 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car02g00927 575 PRINTS Plant peroxidase signature 362 372 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car02g00927 575 PRINTS Plant peroxidase signature 343 356 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car02g00927 575 PRINTS Plant peroxidase signature 488 503 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car02g00927 575 PRINTS Plant peroxidase signature 303 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car02g00927 575 SUPERFAMILY Heme-dependent peroxidases 269 574 IPR010255 GO:0004601|GO:0006979|GO:0020037
Car02g00927 575 PANTHER PEROXIDASE 72-RELATED 259 573 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00927 Car-Chr2 15252276 15258326 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00927 242 575 Peroxidase AT1G68850 68.358 1.23e-171 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00927 K00430 - gmx:100780750 581.637