Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00912 ATGAGTGAGAAAGAAAAGTTTGAGGTAGATAGAAATGGGGATCCTATGAGTTATTCTAGTGGTATGCCACTTGATTGGAGATTTGGGAGTGGCAATCTTGTAAATTCATCTGTTGGTTTGGTTACTATTGGAAATTCTATGAATATCAATAGAGGAGATCTAATTGGCTCTTCTTCATGTTCCTCTGCCTCAATGGTGGATACTTTTAGTCCTAACTTTTGGGACCATCCAACTAACTCACAAAATTTGGGATTTTGTGACATCAATGGGAGTTCTTCGAATGCCGCCGGAATTAGAAAAGATGGATTTGGTTTTGGTGATGGTTTTCTACCAAATGGACAAGGGGTTTTTCAAAATAGTTTGTCTCAGTTTCCGACGGATTCAGGATTTATTGAAAGGGCTGCGAGGTTCTCGTGCTTCGGTGGAGGGAATTTCGGCGATGTGGTTAGTTCGTATGGGATTCCTCAATCCATTGGTATGTATGGTGGGACAGTCAGTGCAATTCATGGAAATAGAGATGAACTTGCAGGTATTGGATTGAAAGTAGCAATTGGAGGACAATCTCAAGATATTGATCCTAATGTTGTTGAAGCTACAAAAGCCGTGTCTCCATTGATTGAGCATATGGCTACTCAAGGAAGTCCTCTAAAGAATGATAGAAGCGACAGCCGTGTCGTGTCTCATGATGATGGGAAGCAAGCTCTTGTTAGACCTGTTAATGATTCTGATAGAGGTGAATCGGGTGATGATGATGGTGACGGTTGTGGACAGGATGATTCACCAATGTTGGAAGGTACTAGTGGCGAACCTTCTGTTAAAGGACTAAACTCGAAGAAAAGGAAAAGAAATGGACCGGATGCTGATAATGATAGAGCGAACCGAACTCAAGAACTACAAAGTGAAGGTGCAAAGGACAACCCTGAGCATCAACAGAAGGGAGATCAACAACCAAAGGCTTCTGGGAAGAATGCTAAACAGGGCTCTCAAACTTCTGATCCACCTAAGGAGGAATACATACATGTTAGGGCTCGTCGGGGTCAAGCAACAAACAGCCATAGCCTTGCAGAGAGGGTGAGGAGGGAAAAGATAAGCGAGAGAATGAAGTTTCTTCAAGAACTTGTGCCTGGATGCAGCAAGGTCACTGGCAAGGCAGTGATGCTGGACGAAATCATCAACTATGTACAGTCACTTCAACGACAGGTTGAGTTTTTGTCTATGAAACTTGCAACTGTAAATCCACGGCTGGATTTTAATATTGAAGGCCTTCTTGCTAAAGAGATTCTTCACCAACGGCCCGGTCCTTCATCTGCACTAGGATTTCCTCTAGAGATGTCTATGAATTTTCCTCCATTACATCCATCTCAACCACGGATGATTCAGTCAATTATTCCAAACATTGCCAACCCGTCCGATATCCTTCGAAGAACTATTCATTCACATTTAACACCTTTGACTGGAGGATTCAAGGAGCCAAATCAGATGCCGGACGTGTGGGAGGACGAGCTTCATAATGTTATTCAAATGAGTTTTGCAACAACTGCTCCCATGAGTAGCCAAGATGTTGACGGTACTGATACAACAAATCAGATGAAAGTTGAACTTTGA 1605 0.4268 MSEKEKFEVDRNGDPMSYSSGMPLDWRFGSGNLVNSSVGLVTIGNSMNINRGDLIGSSSCSSASMVDTFSPNFWDHPTNSQNLGFCDINGSSSNAAGIRKDGFGFGDGFLPNGQGVFQNSLSQFPTDSGFIERAARFSCFGGGNFGDVVSSYGIPQSIGMYGGTVSAIHGNRDELAGIGLKVAIGGQSQDIDPNVVEATKAVSPLIEHMATQGSPLKNDRSDSRVVSHDDGKQALVRPVNDSDRGESGDDDGDGCGQDDSPMLEGTSGEPSVKGLNSKKRKRNGPDADNDRANRTQELQSEGAKDNPEHQQKGDQQPKASGKNAKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGLLAKEILHQRPGPSSALGFPLEMSMNFPPLHPSQPRMIQSIIPNIANPSDILRRTIHSHLTPLTGGFKEPNQMPDVWEDELHNVIQMSFATTAPMSSQDVDGTDTTNQMKVEL 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00912 534 CDD bHLH_AtBPE_like 337 422 - -
Car02g00912 534 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 347 397 IPR011598 GO:0046983
Car02g00912 534 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 10 533 IPR024097 GO:0006355
Car02g00912 534 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 345 416 IPR036638 GO:0046983
Car02g00912 534 MobiDBLite consensus disorder prediction 274 312 - -
Car02g00912 534 MobiDBLite consensus disorder prediction 313 333 - -
Car02g00912 534 MobiDBLite consensus disorder prediction 221 251 - -
Car02g00912 534 Pfam Helix-loop-helix DNA-binding domain 350 398 IPR011598 GO:0046983
Car02g00912 534 SMART finulus 353 403 IPR011598 GO:0046983
Car02g00912 534 PANTHER BHLH TRANSCRIPTION FACTOR 10 533 - -
Car02g00912 534 MobiDBLite consensus disorder prediction 210 336 - -
Car02g00912 534 Gene3D - 344 417 IPR036638 GO:0046983
Car02g00912 534 MobiDBLite consensus disorder prediction 514 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00912 Car-Chr2 14728697 14732791 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00912 1 512 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 41.405 1.16e-105 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Car02g00912 HLH 5.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00912 - - gmx:100797720 770
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00912 02 14728697 14732791 Car02g00912 02 14728697 14732791 ECH