Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00901 ATGACAAAACAAGCAATGGATATTTGTAATGAGGTTTTGGATTATGCTGTTGATGGTATTCATAGATCTATTGACACAATGGATAAATATGATTTCAATAAGTTGAGTGAATATGCTTATGATCTTAAGGTTTGGTTAACTGGTACACTTTCTCATCAACAAACATGTTTGGATGGTTTTGAGAATACAACAACTAAAGCTGGTGAAATTATGGCTAAGGCTTTGAACACTTCTTTGGAATTAAGTAGTAATTCTTTGGACATTATTAATGCTGTTTCTAGCTTACTTAAGGATGTTGGTGACAATAATGTTAATGTAAATCTTAATAGGAGGCTTTTGTCTAATGATGGTTTTCCTTCTTGGGTTAGTGAAGGGCAAAGACATCTTTTGATGGAAGGAAATTTTAAGCCAAATGATGTTGTGGCTCAAGATGGTAGTGGACAATTTAAGACATTAAGTGAAGCTCTTTTGACAGTTCCTTTTTATATTGCACAACCTTTTGTGATTTATGTTAAGGCTGGTATTTATAATGAGAATGTTAATGTGCTTAAAGAAATGACTCATGTTACTATCATTGGTGATGGTCCTACAAAGACTAGATTCACTGCTAGCCTTAACTATGTTGATGGTGTCCAAACTTACAACACTGCAACTTTTGGTGTAAATGGTGCAAACTTCATGGAAAAGAATGTTGGATTTGAGAACACAGCAGGAGCAGAGAAACATCAAGCAGTAGCACTACGAGTAACAACAGATCAAGCAGTATTCTACAACTGTCAAATGGATGAACCAGCAAACCATAGTCTTGAGGATGCACAAGCACCGCAAATCAATTCATCTGAAACCACACTTGAAGAAGTCTTAGCAGTTCCAGAGGAAAATGGGAATGACAATGTATCCAATACAGAAGATTTGGAAGTTATTACATGTGAAGAAAAGAATTCAGAGGAAGCTAAAGAACCCCATAATGCACAAAAACAGAAAAGAAGGTACCGGGAAAAGAAAGCTACAAAGTCAAGGCAAAAGTAG 1029 0.3557 MTKQAMDICNEVLDYAVDGIHRSIDTMDKYDFNKLSEYAYDLKVWLTGTLSHQQTCLDGFENTTTKAGEIMAKALNTSLELSSNSLDIINAVSSLLKDVGDNNVNVNLNRRLLSNDGFPSWVSEGQRHLLMEGNFKPNDVVAQDGSGQFKTLSEALLTVPFYIAQPFVIYVKAGIYNENVNVLKEMTHVTIIGDGPTKTRFTASLNYVDGVQTYNTATFGVNGANFMEKNVGFENTAGAEKHQAVALRVTTDQAVFYNCQMDEPANHSLEDAQAPQINSSETTLEEVLAVPEENGNDNVSNTEDLEVITCEEKNSEEAKEPHNAQKQKRRYREKKATKSRQK 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00901 342 Pfam Plant invertase/pectin methylesterase inhibitor 4 88 IPR006501 GO:0004857
Car02g00901 342 Pfam Pectinesterase 140 262 IPR000070 GO:0030599|GO:0042545
Car02g00901 342 MobiDBLite consensus disorder prediction 328 342 - -
Car02g00901 342 MobiDBLite consensus disorder prediction 290 342 - -
Car02g00901 342 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 93 IPR035513 -
Car02g00901 342 CDD PMEI-like_3 1 94 - -
Car02g00901 342 PANTHER PECTINESTERASE 1 262 - -
Car02g00901 342 PANTHER PECTINESTERASE 1 262 - -
Car02g00901 342 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 2 92 IPR035513 -
Car02g00901 342 SUPERFAMILY Pectin lyase-like 137 262 IPR011050 -
Car02g00901 342 Gene3D - 132 267 IPR012334 -
Car02g00901 342 MobiDBLite consensus disorder prediction 306 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00901 Car-Chr2 14327703 14329233 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00901 2 262 Carbohydrate Esterase AT5G49180 51.311 4.95e-87 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00901 K01051 - gmx:100784682 375.17