Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00895 atgacctcaaaaacaagaacCTTTACCATCAATGTTGCAATCATAGTAGCATTGTTCAGCGCCAATGTTGTATTATCAGATGACAATGCTGCAGTCCCTGCTGAAAGAGCCGAAGTAGATTCATGGTTCAATAGCAATATAGGTCCATTAGAACAAAGAAAAAGCACCCTTGACCCTGCATTGGTAACTGCAGAGGCAAATGCTACCATTGTGAAAGTAAATCAAGATGGTAGTGGTGATTTCAAATCCATAACTGATGCCATTAATAGCATTCCAAGTGGGAACACCCAACGTGTGATTCTGAATATTGGTGGTGGAAATTATCAGGAGAAAATTAAAATTGAAAAGACAAAGCCTTTTATTACATTTATTGGTACACCAAGCAATATGCCGAATTTGACATATGGTGGTACTGCACAAGAATATGGCACGGTTGATAGTGCTACACTGATTGTTGAATCAGATTATTTTGTTGCTTCTAACATCATGATATCGAATTCTGCACCAAGACCTGATGGAAAAAAGTCAGGTGCTCAAGCAGTTGCAATGAGAATTACAGGTGACAAAGCAGCATTTTATAATTGCAAGTTTTTGGGGTTCCAGGACACAATTTGTGATGACAAGAATATACACTTTTTCAAAGATTGCTTAATCCAAGGCACAGTGGACTTCATTTTTGGAAATGGAAGGTCATTATATTTGAAAAATGAATTGAGAGTACTTGGTAACGCTGAAATGACAGTGATAGTGGCACAAGCAAGAAAAAGTGAATCAGAGAAGAGTTTATACACATTTGTGCATTGTGATGTAACTGGAACTGGAACTGGCACTTACTTAGGAAGAGCATGGATGGCTTATTCCAAAGTTATCTTTGCTTATTCAACTTTGAGTAGTGTTCTAAATCCATTAGGGTGGAGTAACAACAGGCACCCTGAATATGACAAAACTTCATATTTTGGAGAGTACATGAACACAGGACCAGGAGCAGATACCAAAGGGCGAGCACCTATCACAAGACAACTTACTGATGCAGAGGTTAAACCTTTCCTTACGCTTGGATCGATTGAAGCTTCTAAATGGTTGCTTCCTCCTCCAAAAGCCTAA 1104 0.3804 MTSKTRTFTINVAIIVALFSANVVLSDDNAAVPAERAEVDSWFNSNIGPLEQRKSTLDPALVTAEANATIVKVNQDGSGDFKSITDAINSIPSGNTQRVILNIGGGNYQEKIKIEKTKPFITFIGTPSNMPNLTYGGTAQEYGTVDSATLIVESDYFVASNIMISNSAPRPDGKKSGAQAVAMRITGDKAAFYNCKFLGFQDTICDDKNIHFFKDCLIQGTVDFIFGNGRSLYLKNELRVLGNAEMTVIVAQARKSESEKSLYTFVHCDVTGTGTGTYLGRAWMAYSKVIFAYSTLSSVLNPLGWSNNRHPEYDKTSYFGEYMNTGPGADTKGRAPITRQLTDAEVKPFLTLGSIEASKWLLPPPKA 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00895 367 Gene3D - 68 364 IPR012334 -
Car02g00895 367 ProSitePatterns Pectinesterase signature 2. 218 227 IPR033131 -
Car02g00895 367 PANTHER PECTINESTERASE 63-RELATED 36 362 - -
Car02g00895 367 SUPERFAMILY Pectin lyase-like 66 361 IPR011050 -
Car02g00895 367 Pfam Pectinesterase 71 335 IPR000070 GO:0030599|GO:0042545
Car02g00895 367 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 36 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00895 Car-Chr2 13995244 13997316 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00895 11 365 Carbohydrate Esterase AT1G69940 56.145 8.72e-152 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00895 K01051 - gmx:100786427 554.288