Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00871 ATGTTCTCAGGTGGGGCTCCTCTAAGAAAAGAGGTTATCGAAGGGTTTATTGAAAAGTTCCCAAATGTTACGATACTTCAGGGTTATGGTCTAACAGAAACCTCTGGAGTTGGGGCTTCCACTAACTGTTTTGAAGAGAGTCGTAAGTATGGCACGACGGGGCTTTTGTCTTCTTCAACGGAGGCTATGATTGTCGACATTGACACTGCTCAACCACTGGCTATTAATCAGACAGGTGAACTTTGGCTCCGGGGTCCCACTATCATGAAAGGTTATTTAAGTAACGAGGAGGCAACTAAATCAACCCTTACTTCAGAGGGTTGGTTAAAAACAGGGGATATTTGCTATATTGATAGCGATGGATACTTATTTGTGGTTGATCGCTTGAAAGAGCTAATTAAATATAAGGGATATCAGGTCCCTCCAGCAGAACTTGAGGCTCTATTGCTGACTCATCATGCTATTCTAGATGTTGCTGTTATACCGTAA 489 0.4254 MFSGGAPLRKEVIEGFIEKFPNVTILQGYGLTETSGVGASTNCFEESRKYGTTGLLSSSTEAMIVDIDTAQPLAINQTGELWLRGPTIMKGYLSNEEATKSTLTSEGWLKTGDICYIDSDGYLFVVDRLKELIKYKGYQVPPAELEALLLTHHAILDVAVIP 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00871 162 PANTHER 4-COUMARATE--COA LIGASE-LIKE 8 3 162 - -
Car02g00871 162 Pfam AMP-binding enzyme 2 135 IPR000873 -
Car02g00871 162 Gene3D - 1 130 IPR042099 -
Car02g00871 162 Gene3D - 131 162 IPR045851 -
Car02g00871 162 SUPERFAMILY Acetyl-CoA synthetase-like 1 162 - -
Car02g00871 162 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 3 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00871 Car-Chr2 13304177 13305320 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00871 4 162 Monolignol Biosynthesis Gene Families AT1G20500 71.698 1.36e-78 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00871 K10526 - gmx:100811344 253.062