Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00864 ATGAACAACGAGGAGAAACTCACCATGGATTTGATTCCACCATCTGATCAACACCTCTGTTACGTTCGTTGCAACTTCTGTAACACTGTCCTTGCTGTTGGAATCCCATGCAAGAGGCTTCTAGACACTGTGACAGTAAAATGTGGACACTGCAGCAACCTCTCTTTTCTCACCACTAGACCACCGACTTCCAAAAATCATACTCTAGTCGATCACACCCTCACTCTCCAGGGAGTTTACAGTTGCAAAAAAGGTCAAGCAACGTCTTCTTCGTCCTCTTCACCAACTACATCGACCGAGTCATTGTCTCCTAAAGCAGCACCATTTGTTGTTAAACCACCTGAAAAGAAGCACCGTCTCCCATCTGCATACAACCGTTTCATGAAAGAGGAGATCCAGCGCATCAAAGCAGCCAACCCTCAGATCCCACATCGAGAAGCTTTCAGTGCTGCTGCAAAAAATTGGGCTAGATTCATCCCAAATTCACCAACAAGTTCAATTCCAGCAAGTAAAATTGAATGA 522 0.4502 MNNEEKLTMDLIPPSDQHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLTTRPPTSKNHTLVDHTLTLQGVYSCKKGQATSSSSSSPTTSTESLSPKAAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPQIPHREAFSAAAKNWARFIPNSPTSSIPASKIE 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00864 173 MobiDBLite consensus disorder prediction 86 107 - -
Car02g00864 173 SUPERFAMILY HMG-box 101 156 IPR036910 -
Car02g00864 173 PANTHER PROTEIN YABBY 6-RELATED 7 170 IPR006780 GO:0007275
Car02g00864 173 MobiDBLite consensus disorder prediction 86 104 - -
Car02g00864 173 Pfam YABBY protein 16 158 IPR006780 GO:0007275
Car02g00864 173 PANTHER PROTEIN CRABS CLAW 7 170 - -
Car02g00864 173 Gene3D High mobility group box domain 100 161 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00864 Car-Chr2 12978492 12980070 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00864 1 165 C2C2-YABBY Transcription Factor Family AT1G69180 65.089 1.57e-64 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Car02g00864 YABBY 5.7e-55 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00864 K25796 - gmx:100819079 287.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00864 02 12978492 12980070 Car02g00864 02 12978492 12980070 ECH