Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00860 ATGCTTAACCCAATGTTTGATGTTATTCTTCTTCAAACCATTCTTCTTTTTGGCTTCTCTTTCTCTTCTAATATCAACCATGAAGTCACAACTCTCTTCTCATGGCTTCATACTTCAACTTCAACTTCAACACCACCACCTTTATCTTTCTCTAACTGGAACATTCTTGATACAAATCCATGCAACTGGACCTACATAACATGTTCCTCAACTTCCTTTGTAACTGAAATCAACATTCAATCTATCCCTCTTCAACTTCCTATACCTTCCAATCTCTCTTCATTTATCTTTCTTAACAAGCTTATCATTTCTGATTCCAATCTCACTGGAACCATTCCATTTGACATTGGTCATTGTTCTTCACTTACTGTCATTGACCTTAGTTTCAACAATCTTGTTGGTTCCATTCCTTCAAGTATTGGAAAACTCAAAAATCTTGTCAACTTGTCTTTGAATTCAAACCAACTTACTGGAAAAATCCCTTATGAGATTAGCAACTGCACTAGTCTCAAAAGTCTTGTCCTTTTTGATAATCAGTTAAGTGGGAGTATCCCTTTTGTGATTGGAAAGTTGTCAAAACTTGAAGTCCTTAGAGTAGGAGGAAACAAGGATATTGTTGGAAATATACCTCAAGAGATAGGAGAATGTAGTAATTTGACAGTTTTAGGGCTGGCTGATACAAGAATTTCAGGTTCTTTGCCTGTTTCTTTAGGTCAGCTTAAAAAGCTTCAAACTTTGTCAATTTATACTACTATGATATCTGGTGAAATTCCAAGAGAGTTAGGTAACTGTTCTGAACTTGTTGATTTGTTCCTATATGAAAATAGTTTATCAGGTTCTATTCCTAATGAGATTGGTAAGTTAAAAAAGATGCAACAGTTGTTTTTGTGGCAGAATGGTCTTGTTGGTGATATTCCTAATGAGATTGGTAATTGTTCAAGTTTGAGAAACCTTGATCTATCCTTGAATTCTTTATCTGGAACTATACCTTTGTCTTTAGGGAGTCTTTTAGAGCTTGAAGAGTTTATGATTAGTGATAATAATGTATCTGGTTCAATACCTGCAAGTCTTTCAAATGCTGAAAAGCTTCAACAGTTGCAAGTTGACACAAATCAGCTTTCAGGTTTGATTCCACCTGAGATTGGGAAGTTGTCAAATTTGATGGTGTTTTTTGCTTGGCAGAATCAGCTTGAAGGAAGCATTCCTTCCAGTTTGGGAAACTGTAGTAAGCTACAAGCACTTGACTTGTCTAGAAATTCACTCACTGGAAGTATTCCTGGTGGACTGTTTCAGCTCCAAAACCTCACAAAAATGCTTTTGATTTCGAATGATATATCGGGTTCGATACCCTCGGAAATAGGAAGTTGCAGCTCTCTTATAAGGTTGAGGCTTGGAAACAATAGGATTACTGGAAGCATTCCTAAGACAATAGGAAGTCTTAAGAGCTTGAACTTTTTAGATCTATCTGGGAACCGACTTTCTGGGCCGGTTCCCGATGAAATAAGAAGCTGCACACAACTGCAAATGATAGACTTCAGTACTAACAATTTACAAGGCTCACTTCCAAATTCCTTGTCATCACTATCTTCACTTCAGGTATTGGATGTATCTTTTAACAAGTTTTCAGGTCCATTACCAGCGAGTTTAGGCCGTCTTGTTTCTCTAAGTAAGTTAATATTAGGCAATAACTTGTTTTCTGGACCAATTCCTGCATCACTAAGCCTGTGTTCAAATCTCCAACTTCTTGATCTTAGTGGAAACCAGCTCAGCGGAAGCATACCGGCCGAGCTAGGACAGATTGAAGCTCTAGAAATTGCTCTCAATCTTAGTTGCAATTCAATAAGTGGAACAATACCACCTCAGATATCAGCTCTTAACAAGCTTTCCATACTAGACCTTTCACATAACCAGTTAGAAGGAGATTTGCAAGCTCTTTCCGAGCTCGATAACCTTGTCTCCCTCAATGTTTCCTTCAACAAATTTACCGGATATCTTCCGGATAACAAGCTTTTCAGGCAACTAACATCAAAAGACCTCACTGGAAATCAAGGACTTTGCACTTCAGGTCAGGACTCATGCTTTTTAAAGGATTATAGCAAGACTGATATGGCACTGAATGAGAAGAATGATGTAAGAAAATCGCGAAGGATTAAGCTTGCCATTGGTTTGTTGATAGCCTTAACAGTATTAATGATACTTATGGGTATAACTGCTGTCATCAAAGCAAAAAGAACCATTAGAGATGATGATTCAGAATTAGGAGACTCATGGCCATGGCAATTCATACCATTTCAGAAGCTAAACTTTTCAGTGGAACAAGTACTGAGATGTTTGATCGATAGGAATATAATCGGTAAAGGATGTTCTGGTGTTGTTTATCGAGGTGAAATGGATAACGGCGAAGTCATTGCTGTGAAGAAACTGTGGCCTATAACAACTGATGAATTAGGAGAGGCATTGAAGGAATATAAAAGTGGAGTTCGAGACTCGTTCTCAGCTGAGGTGAAGGCACTCGGCTCGATCCGCCATAAGAACATTGTAAGGTTCTTAGGTTGTTGTTGGAACAGGAGAACAAGATTGCTTATTTTTGATTATATGCCAAATGGAAGTTTGAGCAATGTACTTCATGAGAGGACTGGAAATTCTCTGGAATGGGAACTTAGATTCCGAATTCTGTTAGGTGCTGCAGAAGGACTTGCATATCTACATCATGATTGTGTTCCTCCTATAGTCCACAGAGATATTAAAGCCAATAACATTCTTATTGGACTTGAATTTGAACCTTATATTGCTGACTTTGGCTTGGCCAAGCTTGTTGATGATGGTGATGTCGGTCGGTCGTCCAATACAGTTGCTGGTTCCTATGGATATATTGCTCCAGAATATGGCTATATGATGAAGATCACAGAGAAGAGCGATGTTTATAGCTACGGTGTAGTTTTGCTAGAAGTCTTGACTGGTAAGCAACCGATTGATCCAACGATACCGGATGGTTTACATGTTGTTGATTGGGTGAGACAGAAAAGGGGTATTGAAGTACTTGATCCTAGCTTACTCTCTAGACCAGAGTCAGAAATAGAAGAAATGATACAGGCATTAGGAATAGCATTATTGTGTGTAAATTCATCTCCTGATGAAAGACCAACAATGAGAGATATAGCTGCCATGCTCAAGGAGATAAAGCATGAAAGAGAGGAATATGCAAAATTTGATGTGCTTTTAAAAGGGTCTCCTGCAAAAGTTGTTGCAACATCTTCATCAGCAGCATCAGTCATGCAAAGTTTGAATACAAAATGCAACAACACAAGCTTCTCTGTGTCTTCACTGCTTCATTCATCTTCAAGTTCTAAGTTGGTTTTCAAATGA 3366 0.3821 MLNPMFDVILLQTILLFGFSFSSNINHEVTTLFSWLHTSTSTSTPPPLSFSNWNILDTNPCNWTYITCSSTSFVTEINIQSIPLQLPIPSNLSSFIFLNKLIISDSNLTGTIPFDIGHCSSLTVIDLSFNNLVGSIPSSIGKLKNLVNLSLNSNQLTGKIPYEISNCTSLKSLVLFDNQLSGSIPFVIGKLSKLEVLRVGGNKDIVGNIPQEIGECSNLTVLGLADTRISGSLPVSLGQLKKLQTLSIYTTMISGEIPRELGNCSELVDLFLYENSLSGSIPNEIGKLKKMQQLFLWQNGLVGDIPNEIGNCSSLRNLDLSLNSLSGTIPLSLGSLLELEEFMISDNNVSGSIPASLSNAEKLQQLQVDTNQLSGLIPPEIGKLSNLMVFFAWQNQLEGSIPSSLGNCSKLQALDLSRNSLTGSIPGGLFQLQNLTKMLLISNDISGSIPSEIGSCSSLIRLRLGNNRITGSIPKTIGSLKSLNFLDLSGNRLSGPVPDEIRSCTQLQMIDFSTNNLQGSLPNSLSSLSSLQVLDVSFNKFSGPLPASLGRLVSLSKLILGNNLFSGPIPASLSLCSNLQLLDLSGNQLSGSIPAELGQIEALEIALNLSCNSISGTIPPQISALNKLSILDLSHNQLEGDLQALSELDNLVSLNVSFNKFTGYLPDNKLFRQLTSKDLTGNQGLCTSGQDSCFLKDYSKTDMALNEKNDVRKSRRIKLAIGLLIALTVLMILMGITAVIKAKRTIRDDDSELGDSWPWQFIPFQKLNFSVEQVLRCLIDRNIIGKGCSGVVYRGEMDNGEVIAVKKLWPITTDELGEALKEYKSGVRDSFSAEVKALGSIRHKNIVRFLGCCWNRRTRLLIFDYMPNGSLSNVLHERTGNSLEWELRFRILLGAAEGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLAKLVDDGDVGRSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVLLEVLTGKQPIDPTIPDGLHVVDWVRQKRGIEVLDPSLLSRPESEIEEMIQALGIALLCVNSSPDERPTMRDIAAMLKEIKHEREEYAKFDVLLKGSPAKVVATSSSAASVMQSLNTKCNNTSFSVSSLLHSSSSSKLVFK 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00860 1121 SUPERFAMILY L domain-like 371 694 - -
Car02g00860 1121 Gene3D Ribonuclease Inhibitor 426 695 IPR032675 -
Car02g00860 1121 Gene3D Ribonuclease Inhibitor 329 425 IPR032675 -
Car02g00860 1121 ProSitePatterns Serine/Threonine protein kinases active-site signature. 910 922 IPR008271 GO:0004672|GO:0006468
Car02g00860 1121 Pfam Leucine rich repeat 121 180 IPR001611 GO:0005515
Car02g00860 1121 SMART LRR_typ_2 625 648 IPR003591 -
Car02g00860 1121 SMART LRR_typ_2 143 167 IPR003591 -
Car02g00860 1121 SMART LRR_typ_2 576 600 IPR003591 -
Car02g00860 1121 SMART LRR_typ_2 288 312 IPR003591 -
Car02g00860 1121 SMART LRR_typ_2 528 552 IPR003591 -
Car02g00860 1121 SMART LRR_typ_2 408 432 IPR003591 -
Car02g00860 1121 SMART LRR_typ_2 480 504 IPR003591 -
Car02g00860 1121 ProSiteProfiles Protein kinase domain profile. 778 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00860 1121 SUPERFAMILY Protein kinase-like (PK-like) 756 1058 IPR011009 -
Car02g00860 1121 Gene3D Ribonuclease Inhibitor 224 328 IPR032675 -
Car02g00860 1121 ProSiteProfiles Leucine-rich repeat profile. 627 649 IPR001611 GO:0005515
Car02g00860 1121 PRINTS Leucine-rich repeat signature 411 424 - -
Car02g00860 1121 PRINTS Leucine-rich repeat signature 625 638 - -
Car02g00860 1121 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 9 1114 - -
Car02g00860 1121 PANTHER RECEPTOR-LIKE PROTEIN KINASE 2 9 1114 - -
Car02g00860 1121 Gene3D Transferase(Phosphotransferase) domain 1 866 1075 - -
Car02g00860 1121 SUPERFAMILY L domain-like 41 395 - -
Car02g00860 1121 SMART serkin_6 778 1061 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00860 1121 Gene3D Ribonuclease Inhibitor 144 216 IPR032675 -
Car02g00860 1121 Gene3D Ribonuclease Inhibitor 29 143 IPR032675 -
Car02g00860 1121 Pfam Protein tyrosine and serine/threonine kinase 782 1056 IPR001245 GO:0004672|GO:0006468
Car02g00860 1121 Gene3D Phosphorylase Kinase; domain 1 765 865 - -
Car02g00860 1121 Pfam Leucine rich repeat N-terminal domain 40 69 IPR013210 -
Car02g00860 1121 ProSitePatterns Protein kinases ATP-binding region signature. 784 807 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00860 Car-Chr2 12770331 12774662 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00860 49 1090 Receptor kinase-like Gene Family AT5G56040 47.985 0.0 964
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Car02g00860 PK_Tyr_Ser-Thr 6.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00860 - - mtr:MTR_5g045910 1842.78