Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00832 ATGGCTCTTCTGGGTTATTTTGTGCTTTTCCTAGCCCTGACTGGCTCTTCAAGTGGTGCTCTTTACTGTGTGTGTAAAGATGGTGTGGGTGATGCAAGTCTTCAGAAGGCAATAGATTATGCTTGTGGTGCTGGAGCTGATTGTACACCTATTACTCAAAATGGAGCATGTTTTCAACCCAATACTGTGAAGGATCATTGCAATTATGCTGTTAATAGTTATTTTCAGAAAAAGGGTCAAGTTCAGGGAAGCTGTGATTTTTCTGGTTGTGCTACAACTAGTCCAACTCCACCTTCTACTGCAGTATCTACTTGTGTTTTTCCCTCAAGCAATACAGGAGGTacaaccacaacaccaacaaccaacacaccagcaGNNNNNNNNNNNNNNNNCCACTCCCTCAAGTACAACACCAGGAACAAGCACCGGAACAGGTATTggaacaggaacaggaacaggaacaggtacaggaacaggtacaggtacaggtacaggaacTGGCACAACAACAGGTGGTCCTAA 522 0.3448 MALLGYFVLFLALTGSSSGALYCVCKDGVGDASLQKAIDYACGAGADCTPITQNGACFQPNTVKDHCNYAVNSYFQKKGQVQGSCDFSGCATTSPTPPSTAVSTCVFPSSNTGGTTTTPTTNTPAXXXXXXHSLKYNTRNKHRNRYWNRNRNRNRYRNRYRYRYRNWHNNRWS 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00832 173 SMART X8_cls 21 107 IPR012946 -
Car02g00832 173 PANTHER BETA-1,3 GLUCANASE 1 118 IPR044788 -
Car02g00832 173 Pfam X8 domain 22 92 IPR012946 -
Car02g00832 173 Gene3D - 16 118 - -
Car02g00832 173 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN 1 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00832 Car-Chr2 12049764 12052589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00832 13 99 Glycoside Hydrolase AT2G01630 42.045 7.68e-20 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00832 - - mtr:MTR_5g044530 193.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01846 06 18304006 18306287 Car02g00832 02 12049764 12052589 PCT