Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00829 ATGGAACAACAACAGATGCAATTAAATCTCAATCAATATGAGTTGGATCTAACGGAACAGACTAAACTTTCATATTATGATGAGCCGAGATTTGAATTTCCATCAGTAGAATCACCTATATTTAATTTCGAACATGCTTCGAATAGAGTTAATTGCATTACAATCACCACCGATCATTTTGATCTTGCATACAATCACCCATCACTTCAACTCCAACCACAACAAGAGCTCAATCAACTACCAATTCAAGAACCCCAAACCAATTCTATGGTTTTAGCAAATGCAAATCCACAACCAAATAAACAAAGATCGAGAAAGAGAAAAAATCAACCATTGAAAATGATTTGCGAGATGAATGCACAGAAGCTCTTAGAAGATCCATGGGCATGGAGAAAATATGGACAAAAACCCATTAAAGGATCTCCATATCCAAGGTTGGTCGTCTTCGGGCTCATGTTCTTGTTGAAAGCAATCAATTTGCTTGCTTTAAATCCTGACTAA 501 0.3633 MEQQQMQLNLNQYELDLTEQTKLSYYDEPRFEFPSVESPIFNFEHASNRVNCITITTDHFDLAYNHPSLQLQPQQELNQLPIQEPQTNSMVLANANPQPNKQRSRKRKNQPLKMICEMNAQKLLEDPWAWRKYGQKPIKGSPYPRLVVFGLMFLLKAINLLALNPD 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00829 166 SUPERFAMILY WRKY DNA-binding domain 120 145 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car02g00829 166 ProSiteProfiles WRKY domain profile. 119 145 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car02g00829 166 MobiDBLite consensus disorder prediction 92 111 - -
Car02g00829 166 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 54 145 IPR044810 GO:0003700
Car02g00829 166 PANTHER WRKY TRANSCRIPTION FACTOR 27-RELATED 54 145 - -
Car02g00829 166 SMART WRKY_cls 124 156 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car02g00829 166 Pfam WRKY DNA -binding domain 125 145 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car02g00829 166 Gene3D WRKY domain 103 148 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00829 Car-Chr2 11909755 11914183 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00829 103 145 WRKY Transcription Factor Family AT5G52830 69.767 4.69e-15 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car02g00829 WRKY 6.5e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00829 K13425 - cam:105851597 196.052