Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00821 ATGTGGAATTTCGCATCACACGCCCTTACAAGCATTAGAATGAAAAGAAGCTCCACAGAGCCAATTCTATCTTGTGCCGAATGCTCAGATGATGAGGTCTGCTCTAATGCCAGCAGAGATGAAGGACTGGAATGCCCAATATGCTGGGAATCTTTCAATATAGTTGAGAACGTGCCTTATGTCTTATGGTGTGGCCACACCCTCTGTAAAAATTGTGTCCTAGGACTTCAGTGGGCTGTGATGAAATTTCCTACCCAACAAATCAAGATTCCGTTCTTCATTTCCTGTCCATGGTGCCACCTACTATCATTCCGGTTCATCTACAAAGGAAATATGAAATTTCCTCGCAAGAATTTTTTCCTTCTTTGGATGGTTGAGAGTCTGAATGGTGATAGGCATAAGGCTGTTTCTTCTTGTGTAGACAGCCAACCAATATGGTCTCCTAAGGGCAACCTTTTGGGAAGTCAAAGTACTAGTTGTAGCCTTAGAAGGCCCTCAATTAGCCATAGTTCTGGACGATTGGGATCTAACAATAATAATGTTGGTGTCAGTGATGGAGAGAGACACTACTTTTGCCTTCATAAATCTCTGGATTTCTTCCTTCACTTTACATCCAAGTTCCCATTGGTCATCATTTTCCTTCTGATAGCCTTTTTTGTAATTCCCTGCAGTGTTGTTATTTTAATCATTTACTTCCTACTCACTATTGTTTTTGCTATCCCATCATTCCTCGTCTTGTACTTTGCATACCCTACTATCCAGAGATTGGTTAGAGAAATAACTACGTAA 789 0.4094 MWNFASHALTSIRMKRSSTEPILSCAECSDDEVCSNASRDEGLECPICWESFNIVENVPYVLWCGHTLCKNCVLGLQWAVMKFPTQQIKIPFFISCPWCHLLSFRFIYKGNMKFPRKNFFLLWMVESLNGDRHKAVSSCVDSQPIWSPKGNLLGSQSTSCSLRRPSISHSSGRLGSNNNNVGVSDGERHYFCLHKSLDFFLHFTSKFPLVIIFLLIAFFVIPCSVVILIIYFLLTIVFAIPSFLVLYFAYPTIQRLVREITT 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00821 262 ProSitePatterns Zinc finger RING-type signature. 64 73 IPR017907 -
Car02g00821 262 PANTHER UBIQUITIN-PROTEIN LIGASE 1 262 - -
Car02g00821 262 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 31 137 IPR013083 -
Car02g00821 262 ProSiteProfiles Zinc finger RING-type profile. 45 100 IPR001841 -
Car02g00821 262 SUPERFAMILY RING/U-box 41 102 - -
Car02g00821 262 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 262 - -
Car02g00821 262 Pfam RING-type zinc-finger 45 83 IPR027370 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00821 Car-Chr2 11727660 11729693 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00821 1 262 Miscellaneous Gene Families AT1G69330 58.824 2.43e-106 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00821 - - gmx:100499984 432.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00821 02 11727660 11729693 Car02g00729 02 9876188 9878001 PCT