Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00811 ATGGCGTTTAGAATAGGTATTTTCATAATAACATTGGTTTTGATTATTAAGATTCGAATGTGTGTGTCTCAGATTAACAGGCAGAGCTTTCCTAAGGATTTTGTTTTCGGAACTGCTTCTTCAGCTTTTCAGTACGAAGGTGCAGTAAAAGAAGATGGAAGGGGCCCATCTGTGTGGGATACTTTTTCACATTCTAATGGAGGCAAAATACTACGTAACAGCAATGCTGATGTTGCAGTGGATCAGTATCATCGCTTTGAAGGAGACGTACATATTATGAAGGACATGGGAATGGATGCTTATAGGTTTTCAATTTCCTGGACTCGAATTTTTCCCAATGGATTTGGGGTAGTCAATCAAGCAGGAGTTGATCACTACAATAAACTCATTGATGCTTTACTAGCCAAAGGAATTGAGCCATATGTTACTCTGTACCACTGGGACCTACCTCAAGCCTTAGAAGACAAGTACAAGGGATGGCTTAGCCCTTTAATCATAAAAGATTTTGCAACATATGCTGAGATATGCTTTCAGAAATTTGGAGACAGAGTGAAACATTGGATCACTTTCAATGAGCCACATACATTTTGTATGATGGGATATGATGTTGGACTTCAACCACCAGGAAGATGCTCAATTCTCCTTCACAAGTTGTGTAGTAGTGGAAACTCTTCTACTGAACCTTATATTGTGGCTCATAATGTCCTTATTTCACATGCAGTTGTAGCAGATATTTATAGGAAAAAATATAAGAAAATACAAGGTGGATCTGTGGGAATATCTTTGGATGTAATTTGGTTTGAGTCAGCAACAAATTCCAAAGAAGATATTGAAGCAACTCAGAGAGCCTTGGATTTTACACTTGGCTGGTTTCTTGACCCATTGATATTTGGAGATTATCCAAAATCAATGAAAAGTAGAGTTGGGAGCAGGCTACCAAAATTTTCAAAATCTCAAACTAGTCTTGTTAAGGGTTCATTAGATTTTGTTGGCATCAATCATTACACCACATTTTATGCAATGCACAATGGTTCTGATTTACTTCAAGTTGCACTTCATGACTACATTTCTGACTCTGCTGCTCTTACTCTTCCTTTCAATGGGACCGAGATTATTGGAGAAAGGGCAAATTCTTTATGGTTGTATATAGTACCACAAGGGATGAGAAGCACAATGAATTACATCAAACAGAAGTATGGGAATCCTCTGCTCATTATAACTGAAAATGGAATGGATGATCCAAATGATCCATCTATCTCAATCAATGATGCTCTAAAGGATGACAAGAGGATTAGATATCACAATGACTATTTAAACAACTTATTAGCTTCTATCAAGGAAGATGGGTGCAATGTGAAAGGCTATTTTGTGTGGTCGCTGTTGGATAATTGGGAGTGGCAAGCTGGATACACTTCTAGATTTGGTCTTTATTTCATTGACTACAATGACAATCTAAAGAGATATCCAAAAAAGTCTGTTGAATGGTTTAAGAATTTCTTGAACTAA 1506 0.3718 MAFRIGIFIITLVLIIKIRMCVSQINRQSFPKDFVFGTASSAFQYEGAVKEDGRGPSVWDTFSHSNGGKILRNSNADVAVDQYHRFEGDVHIMKDMGMDAYRFSISWTRIFPNGFGVVNQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQALEDKYKGWLSPLIIKDFATYAEICFQKFGDRVKHWITFNEPHTFCMMGYDVGLQPPGRCSILLHKLCSSGNSSTEPYIVAHNVLISHAVVADIYRKKYKKIQGGSVGISLDVIWFESATNSKEDIEATQRALDFTLGWFLDPLIFGDYPKSMKSRVGSRLPKFSKSQTSLVKGSLDFVGINHYTTFYAMHNGSDLLQVALHDYISDSAALTLPFNGTEIIGERANSLWLYIVPQGMRSTMNYIKQKYGNPLLIITENGMDDPNDPSISINDALKDDKRIRYHNDYLNNLLASIKEDGCNVKGYFVWSLLDNWEWQAGYTSRFGLYFIDYNDNLKRYPKKSVEWFKNFLN 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00811 501 PANTHER BETA-GLUCOSIDASE 7 500 - -
Car02g00811 501 Pfam Glycosyl hydrolase family 1 27 500 IPR001360 GO:0004553|GO:0005975
Car02g00811 501 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 34 48 IPR033132 -
Car02g00811 501 PRINTS Glycosyl hydrolase family 1 signature 326 340 IPR001360 GO:0004553|GO:0005975
Car02g00811 501 PRINTS Glycosyl hydrolase family 1 signature 404 412 IPR001360 GO:0004553|GO:0005975
Car02g00811 501 PRINTS Glycosyl hydrolase family 1 signature 427 438 IPR001360 GO:0004553|GO:0005975
Car02g00811 501 PRINTS Glycosyl hydrolase family 1 signature 449 466 IPR001360 GO:0004553|GO:0005975
Car02g00811 501 PRINTS Glycosyl hydrolase family 1 signature 473 485 IPR001360 GO:0004553|GO:0005975
Car02g00811 501 Gene3D Glycosidases 15 501 - -
Car02g00811 501 PANTHER GLYCOSYL HYDROLASE 7 500 IPR001360 GO:0004553|GO:0005975
Car02g00811 501 SUPERFAMILY (Trans)glycosidases 22 500 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00811 Car-Chr2 11557378 11566338 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00811 19 501 Glycoside Hydrolase AT1G26560 73.967 0.0 769
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00811 K01188 - gmx:100809238 820.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00811 02 11557378 11566338 Car02g00811 02 11557378 11566338 ECH