Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00787 ATGGCAAATTCAAGTGATCAAGACTCCAATTCATTGAATATTTATTATACTCTTGACGAAGATGGATACAAATGGAAAATGCATAGGAAACGTTTGACTATAGATAACAAGTTTCCAAAAACTTATTATACGTGCATTAATCCTGATTGTTCCGTCAAGAAAAGGGTATATAGGAATTCACAGGAAGAAATTAATGTTGAATACAATCAAGAAAATCACAATCACCAACCTCCTGATCCTAATCCAACAATAACTGAATTATTGGATACAAGGACCGGAGAAGTAATATACAAAGACATCCAGGGACACAAGTGGACATGTCATAGGAGAAATTGTAATATTAATGGCACTGGACTTTCAAGAGCTTATTATAACTGCATTTATCCTAATTGTGACGTCAAGAAATTTGTTGTGGGAGATAAAATTACTATCAATGGACCACATAATCATCGACCTCTTAATTTAAATATCCAAGAAAATATTTTAAGTGAATCTACTGAACCTAAACTTCAAAATTTAGTAGAAATAAATTCTGGTGCAGATGTTGGGCCTCAACCAAAAAGGATGAGAAGTACACAAATTACAACTTCAGAACCATGTCCTTATCTAAAAGATATAGAAGAAAATTTGGCGAGGTCACCTAAGGTTGTGAATGAAGTTAAACTATCTGAATATATTGCAGAGTTTCAAAAGTTACTTTGA 702 0.3276 MANSSDQDSNSLNIYYTLDEDGYKWKMHRKRLTIDNKFPKTYYTCINPDCSVKKRVYRNSQEEINVEYNQENHNHQPPDPNPTITELLDTRTGEVIYKDIQGHKWTCHRRNCNINGTGLSRAYYNCIYPNCDVKKFVVGDKITINGPHNHRPLNLNIQENILSESTEPKLQNLVEINSGADVGPQPKRMRSTQITTSEPCPYLKDIEENLARSPKVVNEVKLSEYIAEFQKLL 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00787 233 SUPERFAMILY WRKY DNA-binding domain 113 151 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car02g00787 233 SMART WRKY_cls 19 77 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car02g00787 233 ProSiteProfiles WRKY domain profile. 14 78 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car02g00787 233 SUPERFAMILY WRKY DNA-binding domain 16 78 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car02g00787 233 Pfam WRKY DNA -binding domain 20 76 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car02g00787 233 Gene3D WRKY domain 5 79 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car02g00787 233 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 20 80 IPR044810 GO:0003700
Car02g00787 233 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 119 217 IPR044810 GO:0003700
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00787 20 81 WRKY Transcription Factor Family AT5G56270 40.323 4.74e-11 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car02g00787 WRKY 7.1e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00787 - - cam:105851601 493.041