Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00781 ATGGAACAACAAACACAAGactcaactaacactaaccaaaatgaaactaactctcatcaacatcatcatcatcaccaccatcatcaccatcatcattatcatcatcaacaacatcatcaaaatcagcttcaacaacaatactcaactcaactTGGTTTCTTCAATCATCAAAACAAGTTTCAAAGATACTACCCTGCTCTTCTTCCTTTACCTTCTCTTCAACAACTACCTTTGATTCCACCTTTTCATCAAAATCAAAGCTTTATATCAAAAACCCATTTGCATAAACATCCATGCAAACTCAATAGTTCTCCTTCATCAGATTTCAACCTCTCTCAACTATCACTTGCTCCTTCTCCAAAGGAGCTTCAGAACCAAACTAAAGAATCCCTTAAAGGAGATGATGGGAAGAAGCTCATTTCAACAAGGAAGACACAAGAAGTGACTGTTGCAAGGAGGCCAGATTCTGGTGGCAAAGAAGGTCCTGTGATATCTCTCCTTGCCAACCATTTTCTAGTAAAGTTTGATCCATCACAAAAGTTATATCATTACAATGTTGAAATTAGTCCTCATCCTTCTAAGGAAATTGCTAGAGCAATCAAACAGAAACTTGTAAATAACAATTCTGATGTGCTATTGGGTGCTCTTCCAGCATATGATGGGAGAAATAATCTTTATAGTCCAATTGAATTCCAAAATGATAAGCTTGAGTTCTACATAAGCCTCCCAATTCCATCTAGCAAATCGATAGCGCTTTATGGAGAAACAGATGTTAAGAATGAGAAGCATGAACAACATAAACTTTTTCGGATAAATATCAAACTAGTCTCGAAGATTGATGGAAAAGAGTTGACTAATTACTTGAGCAAAGAAGGCGATGAAGGGATTCCACTTCCTCAAGATTATCTACATGCCTTGGATGTAGTTTTGAGGGAAAGTCCAACTGAGAAATGTATACCTGTAGGAAGGTCATTCTATTCGAGTTCGATGGGGAGAAGCAAAGATATCGGTGGAGGAGCCGTTGGATTGAGAGGCTTCTTTCAAAGTCTTAGACCAACTCAACAAGGACTTGCACTCAATGTTGATTTCTCAGTAACTGCTTTTCATGAGAGCATAGGAGTTATTCCATACCTGCAGAAGCGTCTTGAGTTTCTTAGAGACCTTTCTCAAAGGAAGACAACGTCGCTAACTTGCGAAGAAAGAAAGGAAGTTGAGAAAGCATTGAAGAACATCAGGGTGTTTGTTTGTCATAGAGAAACTGTTCAGAGATATCGTGTCTACGGCTTAACTGAGGAGGCAACTGAAAATCTTTGGTTTGCTGATAGAGATGGGAAGAATCTTAGGCTTGTGAGTTACTTTAAAGATCATTATAACTATGACATACAATTCAGGAAGTTGCCATGCTTGCAAATTAGTAGGAGTAAACCTTGTTATCTGCCTATGGAGCTTTGTGTGATCTGTGAAGGACAAAAGTTTCTTGGGAAACTGTCTGATGATCAGACGGCGAGAATACTCAAGATGGGCTGTCAACGACCCGGAGAGCGAAAAGCCATCATCGAAGGAGTCATGACAGGAAATGTTGGTCCTACCAGTGGTGACCAAGAAAATGAATTCAAACTCCAAGTCTCAAGAGAAATGACAAAGTTGACAGGGAGAATTCTTTACCCTCCAAAACTAAAGCTTGGAGATGGAGGTCATGTGAGAAACCTGACTCCTTCACGTCACGATCGTCAATGGAACCTTCTCGACGGCCACGTCTTCGAAGGAACTACAATCGAAAGATGGGCATTGATAAGTTTTGGTGGCACACCTGAGCAAAAGTCTCATATCCCAAGATTCATAAACCAGTTAACTCAAAGATGTGAACAATTAGGCATTTTTCTTAACAAGAACACAGTTATTAGTCCACAGTTTGAATCAATCCATGTTCTTAACAATGTCACACTTTTGGAATCTAAGCTCAATAGAATCCAGAGAATTTCCTCAAACAATCTGCAGCTTCTTATTTGTATAATGGAAAAAAAACACAAAGGGTATGCAGACTTGAAAAGAATCTCTGAGACGAGTGTCGGCATTGTAAGCCAATGCTGCTTGTATCCAAATCTCATCAAATTAAGTTCACAGTTTTTGGCTAATGTGGCACTCAAGATCAATGCTAAAGTTGGTGGATGCACAGTTGCTTTGTACAACTCGCTTCCTTCACAATTACCGCGCCTTTTCAGCATCGATGAACCTGCGATGTTCATGGGAGCTGACGTGACACATCCTCATCCTCTCGACGATTCAAGTCCTTCGGTGGCTGCTGTTGTTGGCAGCATGAATTGGCCAACAGCAAACAAATACATTTCAAGAATAAGGTCTCAAACACATAGGCAAGAAATCATCCAAGACCTCGGCGCAATGGTGGCCGAGTTGCTCGAAGATTTTCTTCAGGAAGTTGAAAAACTCCCCAACCGAATAATCTTCTTTCGAGATGGAGTTAGCGAAACACAATTCTACAAAGTTCTCCAAGAAGAACTCCAATCCATAAAGCAAGCTTGTTCAAGGTTTCATGGTTATAAACCTTTCATAACTTTTGTAGTTGTCCAAAAGAGACATCACACAAGGTTGTTTCCCTCCGAAACCGATCAATCTTCGAATCACAGAAATTATCAATACGAAAATATTCCTCCAGGAACAGTGGTTGATTCTGTGATTACTCATCCGAAAGAATTTGATTTCTATCTGTGTAGTCACTGGGGTGTCAAAGGAACGAGCCGGCCAACACATTACCATGTCTTGTCGGATGAAAATGAGTTTAGTTCTGATGAATTGCAGAAGCTGGTTTACAATTTGTGCTATACTTTTGTTAGGTGTACTAAACCAATTTCTTTGGTTCCTCCTGCATATTATGCACATTTAGCTGCATATAGGGGAAGACTCTACCTTGAGAGATCAGAGTCCTTAGGTTTGTTCAGAACTGCTTCTACATTGTCAAGAGCTGCTCCTCCAAAGACACCACCTCTACCTAAACTTAGTGAAAATATCAAGAAGCTTATGTTTTATTGCTAG 3051 0.3828 MEQQTQDSTNTNQNETNSHQHHHHHHHHHHHHYHHQQHHQNQLQQQYSTQLGFFNHQNKFQRYYPALLPLPSLQQLPLIPPFHQNQSFISKTHLHKHPCKLNSSPSSDFNLSQLSLAPSPKELQNQTKESLKGDDGKKLISTRKTQEVTVARRPDSGGKEGPVISLLANHFLVKFDPSQKLYHYNVEISPHPSKEIARAIKQKLVNNNSDVLLGALPAYDGRNNLYSPIEFQNDKLEFYISLPIPSSKSIALYGETDVKNEKHEQHKLFRINIKLVSKIDGKELTNYLSKEGDEGIPLPQDYLHALDVVLRESPTEKCIPVGRSFYSSSMGRSKDIGGGAVGLRGFFQSLRPTQQGLALNVDFSVTAFHESIGVIPYLQKRLEFLRDLSQRKTTSLTCEERKEVEKALKNIRVFVCHRETVQRYRVYGLTEEATENLWFADRDGKNLRLVSYFKDHYNYDIQFRKLPCLQISRSKPCYLPMELCVICEGQKFLGKLSDDQTARILKMGCQRPGERKAIIEGVMTGNVGPTSGDQENEFKLQVSREMTKLTGRILYPPKLKLGDGGHVRNLTPSRHDRQWNLLDGHVFEGTTIERWALISFGGTPEQKSHIPRFINQLTQRCEQLGIFLNKNTVISPQFESIHVLNNVTLLESKLNRIQRISSNNLQLLICIMEKKHKGYADLKRISETSVGIVSQCCLYPNLIKLSSQFLANVALKINAKVGGCTVALYNSLPSQLPRLFSIDEPAMFMGADVTHPHPLDDSSPSVAAVVGSMNWPTANKYISRIRSQTHRQEIIQDLGAMVAELLEDFLQEVEKLPNRIIFFRDGVSETQFYKVLQEELQSIKQACSRFHGYKPFITFVVVQKRHHTRLFPSETDQSSNHRNYQYENIPPGTVVDSVITHPKEFDFYLCSHWGVKGTSRPTHYHVLSDENEFSSDELQKLVYNLCYTFVRCTKPISLVPPAYYAHLAAYRGRLYLERSESLGLFRTASTLSRAAPPKTPPLPKLSENIKKLMFYC 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00781 1016 ProSiteProfiles Piwi domain profile. 667 977 IPR003165 GO:0003676
Car02g00781 1016 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 104 1015 - -
Car02g00781 1016 Pfam Argonaute linker 1 domain 320 369 IPR014811 -
Car02g00781 1016 MobiDBLite consensus disorder prediction 1 16 - -
Car02g00781 1016 Pfam Piwi domain 668 974 IPR003165 GO:0003676
Car02g00781 1016 Pfam N-terminal domain of argonaute 164 310 IPR032474 -
Car02g00781 1016 SMART PAZ_2_a_3 379 510 IPR003100 GO:0005515
Car02g00781 1016 ProSiteProfiles PAZ domain profile. 379 488 IPR003100 GO:0005515
Car02g00781 1016 PANTHER PROTEIN ARGONAUTE 7 104 1015 - -
Car02g00781 1016 MobiDBLite consensus disorder prediction 1 45 - -
Car02g00781 1016 Gene3D - 553 729 - -
Car02g00781 1016 MobiDBLite consensus disorder prediction 118 156 - -
Car02g00781 1016 MobiDBLite consensus disorder prediction 19 38 - -
Car02g00781 1016 SMART Piwi_a_2 667 977 IPR003165 GO:0003676
Car02g00781 1016 Gene3D paz domain 365 492 - -
Car02g00781 1016 SMART DUF1785_2 319 371 IPR014811 -
Car02g00781 1016 MobiDBLite consensus disorder prediction 127 154 - -
Car02g00781 1016 Pfam PAZ domain 382 504 IPR003100 GO:0005515
Car02g00781 1016 SUPERFAMILY PAZ domain 366 523 IPR036085 GO:0005515
Car02g00781 1016 Gene3D - 739 1016 IPR036397 GO:0003676
Car02g00781 1016 CDD Piwi_ago-like 536 976 IPR045246 -
Car02g00781 1016 SUPERFAMILY Ribonuclease H-like 651 977 IPR012337 -
Car02g00781 1016 CDD PAZ_argonaute_like 382 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00781 Car-Chr2 11085544 11090888 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00781 158 1016 Eukaryotic Initiation Factors Gene Family AT1G48410 42.411 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00781 K11593 - gmx:100797755 1716.44