Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00777 ATGGCTCTGAATTTTCCCTCAACTACTAGGATTATCAAACCCACAGATGAAGAACTTTTCCAATCATTCCTCTACAACAAAATTAATAATAATCCATTGCCTAATCATATAGCTATCATCGAACTTGATTTGTTCGGTACAAAAAAGAATCCTTGGGAGATTTGGGAAGAGTTTGCAACTTCCCACTCATATTGTGGAAGAGACCTATATTTCTTCAGTGCATTGAAGAAGAAATCTGCGACTAGCTCTCGTTCTGTTCGTCTTATTGGAAAAGGTACATGGGAAGGTGAAGACACCGGTACAGAAATATTCACTAAAGACACAAATCAACTCTTAGGTTTGAGAAAACGATACCGTTTTGAAAAGAGTGATACTGTCCATGATAATGGATGGATCTTGCATGAATATAAACTTGATGCATCATTGATTGCCAATCCTTCGGCGGAGAATTATGTTCTATGCAGATTTAGAAAGAATGTGAAAAAAAATCCAGTTAGTACAAGAAATAGAATAGCAAAAAATGCGAATCGTAGGTTACAAAGAAATAATACAAGTATGGGAAATACTGGACGGGGTAGAAAAAGGAAGAAGACCGTCGCTGAATGTGAGGCTACCACCATATCGGGCAATAACAATAACAATGTTGTGGTGAGAGAATATACTATATATGAAGAACCAATAAACCAATCAAATGGTGGACACAACAGTTCAAATGATGGACACAACAGTTCAATGGTGGTTAAAAAAGAGTATGAATACAAGAAGGGAGTAGAAGAAGAAGGTGTGAAAAATACTTGTCCAAATGATATCATTGTTATTGCACTTGAGTCTTCCACCGATTCTGGGAATGAAAATATTAACCAAAGACCAAGAAGTCCAATTGATAGTGGAAATAACAAGACTGAGGTGGTTAAAACTACCAAAGAAAAAGAAGTTGATAGCATTATGAACAAAGAAGAAGATGATAATCTCAATATGTCTTGGCCAGAGTATTTTGCAATGGAACTGAAAATGATTAATGAAGGATGCTTGATCCAAGAGGAAGAATATGTTCCGATGCTTTCCAATAGTTTTCATAAGGACTTAATCTTGGAATGTTTTAATATGTATTAA 1113 0.3549 MALNFPSTTRIIKPTDEELFQSFLYNKINNNPLPNHIAIIELDLFGTKKNPWEIWEEFATSHSYCGRDLYFFSALKKKSATSSRSVRLIGKGTWEGEDTGTEIFTKDTNQLLGLRKRYRFEKSDTVHDNGWILHEYKLDASLIANPSAENYVLCRFRKNVKKNPVSTRNRIAKNANRRLQRNNTSMGNTGRGRKRKKTVAECEATTISGNNNNNVVVREYTIYEEPINQSNGGHNSSNDGHNSSMVVKKEYEYKKGVEEEGVKNTCPNDIIVIALESSTDSGNENINQRPRSPIDSGNNKTEVVKTTKEKEVDSIMNKEEDDNLNMSWPEYFAMELKMINEGCLIQEEEYVPMLSNSFHKDLILECFNMY 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00777 370 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 13 311 - -
Car02g00777 370 Pfam No apical meristem (NAM) protein 13 138 IPR003441 GO:0003677|GO:0006355
Car02g00777 370 SUPERFAMILY NAC domain 14 157 IPR036093 GO:0003677|GO:0006355
Car02g00777 370 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 13 311 - -
Car02g00777 370 Gene3D NAC domain 15 165 IPR036093 GO:0003677|GO:0006355
Car02g00777 370 ProSiteProfiles NAC domain profile. 6 159 IPR003441 GO:0003677|GO:0006355
Car02g00777 370 MobiDBLite consensus disorder prediction 280 301 - -
Car02g00777 370 MobiDBLite consensus disorder prediction 280 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00777 Car-Chr2 11016271 11019399 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00777 2 155 NAC Transcription Factor Family AT5G13180 33.121 1.72e-16 76.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car02g00777 NAM 4.8e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00777 - K14964 cam:101507022 718.383