Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00767 ATGAATGGAAGAACAAGCTCTGATCTTCCACCAGGTTTCAGATTTCACCCAACTGATGAGGAATTAATTGTTTATTACCTTTGTAACCAAGCAACATCACAACCATGTCCTGCATCTATCATCCCTGAAGTTGATATCTATAAATTTGATCCATGGGAATTACCTGATAAATCAGATTTTGTAGAAAATGAATGGTATTTTTTTAGTCCAAGAGAGAGAAAGTATCCAAATGGGGTGAGGCCAAATAGAGCAACTGTTTCTGGGTATTGGAAGGCTACTGGCACAGACAAATCAATCTTTAGTGGGTCTAAACATATTGGGGTTAAGAAAGCTTTGGTTTTTTATAAGGGTAGGCCACCAAAGGGCCTCAAGACAGATTGGATTATGCATGAGTATAGGTTAATTGGATCAAGAAAACAAGCCAATAGGCAAATTGGATCCATGAGGCTAGATGATTGGGTGTTGTGTAGGATCTATAAGAAGAAGAATACCACAAAATCATTTGACACAAGAGAAGAATACCCTACAAATCAAATCAATGTATCACCAAGAAATGATGATGATAGTGAACAAGAATTGATGAAATTTTCAAGGACATGTTCTCTAACTAATCTTTTGGATATGGACTACTTGGGTCCAATATCACAAATATTATCAGATGGATCATATAACTCAACATTTGAATATCAAATTAACACTGCACATGGTGGAATAATTGTTGACCCATTTGTAAAATCACAAATGGTTGAAATGGCTACTAACTCTTATGCAGCTGATTCAGAGAAAAACAATGTGAAACAGAATAGCAGCTTCAATTCAACCTTATTTGGGAATCAAGTATATGACCATAGAGAATAA 858 0.3555 MNGRTSSDLPPGFRFHPTDEELIVYYLCNQATSQPCPASIIPEVDIYKFDPWELPDKSDFVENEWYFFSPRERKYPNGVRPNRATVSGYWKATGTDKSIFSGSKHIGVKKALVFYKGRPPKGLKTDWIMHEYRLIGSRKQANRQIGSMRLDDWVLCRIYKKKNTTKSFDTREEYPTNQINVSPRNDDDSEQELMKFSRTCSLTNLLDMDYLGPISQILSDGSYNSTFEYQINTAHGGIIVDPFVKSQMVEMATNSYAADSEKNNVKQNSSFNSTLFGNQVYDHRE 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00767 285 Gene3D NAC domain 18 166 IPR036093 GO:0003677|GO:0006355
Car02g00767 285 ProSiteProfiles NAC domain profile. 9 161 IPR003441 GO:0003677|GO:0006355
Car02g00767 285 PANTHER NAC TRANSCRIPTION FACTOR 56 1 252 - -
Car02g00767 285 Pfam No apical meristem (NAM) protein 10 134 IPR003441 GO:0003677|GO:0006355
Car02g00767 285 PANTHER NAC DOMAIN-CONTAINING PROTEIN 1 1 252 - -
Car02g00767 285 SUPERFAMILY NAC domain 6 161 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00767 Car-Chr2 10700152 10702004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00767 1 217 NAC Transcription Factor Family AT1G69490 65.789 3.37e-110 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car02g00767 NAM 2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00767 - - gmx:732552 467.233