Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00755 ATGAAGAATCAAAGTAAGCATTTTGTTCTATCCAGTAATGCCAAGCCAAGACTCAAATGGACTCATGATCTTCACCAAAGATTCATTGAAGCAACTAATCAACTTGGAGGTGCAGAAAAAGCAACACCAAAGAGTCTTATGAGATTGATGGGAATTCCAGGACTTACTTTGTACCATCTCAAGAGCCATTTACAGAAATATAGACTTGGGAAAAGCCAACAGCTAGAAAAATACTCTGACAACAAACAAGAAGATTACACAGAAACAAAGAGCTTTGATGGCCATTGCAGCAGAGAAATCAGTCTTGGGGAGAATCAAATCAATGAAAACATGCATATAGCTGATGCTCTAGAAATGCAAATGGAAGTAGAGAAAAAACTTTATGAACAAATTGAGGTGCAGAAACATTTGCAGCTTCGAATTGAAGCGCAAGGAAAGTATTTACAATCAGTACTATCGAAGGCGCACGAAGCGCTTTCGACATACAATTCTTCTTCAATTGGTATAAAACTAAAAAAATCTGAACTTTCTCAATTGGTTATTATGATCAACAATGCTTGTCCAAATTCTCCAATTTCAGAAGTAATAGAAAATGGAAAATTGAGTTTGAACAGTGAGGAGAGAAAAATGGACAGAGGAACTATTTGTTCATTGGAAAGTTCTTTGATATCTTGTGAAAGCTCAAAGAGAAAAGAAGAGAAACATTCAATAGAAGGTTTGACTAATTCAAGTACTATTTCACTTGAATTGCCACTAATGACGATGCAATCAGAAGAGAAatcagtgtcgtgtctagtatctgagtctgtatctgtatctgATAATTTGAGTAATGAAACTAACGAGAGAAAGAGAAATGCAGCAACTGAATCTGATGGTAACTATATTGAGCAATGTTCATACAAGAAAAGATGTGGCAACAAGATGAAGAAAGAAAAGTTGTCAAAAATGTTTGACTTGAATAGGCAATGTGAGAATGAGATGGACTCAACCAGTTCAAAAATATTGTTAGACTTAAATTGCAGTTTAATTTATGGGAACCATGAAGATGGTTTATAA 1059 0.3333 MKNQSKHFVLSSNAKPRLKWTHDLHQRFIEATNQLGGAEKATPKSLMRLMGIPGLTLYHLKSHLQKYRLGKSQQLEKYSDNKQEDYTETKSFDGHCSREISLGENQINENMHIADALEMQMEVEKKLYEQIEVQKHLQLRIEAQGKYLQSVLSKAHEALSTYNSSSIGIKLKKSELSQLVIMINNACPNSPISEVIENGKLSLNSEERKMDRGTICSLESSLISCESSKRKEEKHSIEGLTNSSTISLELPLMTMQSEEKSVSCLVSESVSVSDNLSNETNERKRNAATESDGNYIEQCSYKKRCGNKMKKEKLSKMFDLNRQCENEMDSTSSKILLDLNCSLIYGNHEDGL 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00755 352 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 15 70 IPR006447 GO:0003677
Car02g00755 352 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 342 IPR044848 GO:0003700
Car02g00755 352 SUPERFAMILY Homeodomain-like 14 70 IPR009057 -
Car02g00755 352 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 4 342 - -
Car02g00755 352 Coils Coil 114 134 - -
Car02g00755 352 Pfam Myb-like DNA-binding domain 17 68 IPR001005 -
Car02g00755 352 Gene3D - 14 72 - -
Car02g00755 352 Pfam MYB-CC type transfactor, LHEQLE motif 111 157 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00755 Car-Chr2 10458498 10460339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00755 8 292 G2-like Transcription Factor Family AT1G69580 46.844 9.15e-69 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Car02g00755 Myb_DNA-binding 2.3e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00755 - - mtr:MTR_5g041350 464.151