Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00753 ATGGCTTCAGACTCCGGATTATCAGAACTTTCCTCTCTCTTCGTTTCATTTATCAGAAACACGAACACAGACATGTCCATTCTCTTACCCAGATCAAGAATCTTCACCTTATCAACAAACAACGACGACCCACTTCAACAATCTCAAAACACCGAAGATTCGAATCATCAAAGAATCATCTTGGTGAACCCTTTCACACAGGGTATGATTGTAATAGACGGAGCTTCAAGTCTCGAAGCTCTTTTCCGTGAAAATTCCACTAAGATTGGTCAACCACCTGCTTCAAAGGAATCAATTGAAGCTATGAAAAGGGTTGAGATTGAAGATGGTGAAGAAGATTTTGGTGAGTGTGTTGTTTGTTTGGAGGAATTTGAGGTTGGTGGGGTTGTTAGAGAAATGCCATGTAATCATAGGTTTCATGGTGATTGTATTGAGAAGTGGTTGGGGATTCATGGGTCTTGTCCTGTTTGTAGGTTTGTTATGCCTGTTGATGAGAAAGATGATGGAAAGAAAATTGATGAAGAAGAAGGTGGTGGAGAGAGGAGAAGGGTTGGTAGTGAAGTTTGGATTAGTTTTTCTTTTAATAGGAATATGGCAAATCAAGCtcaaaatcaaaatcaaaaccaaaatcaaaatcaaaatcaaaatcaaGCTAGTAATGGTGGTGATTCAACTGATTCTACTTCAAATTCTAGAGATGATGATGGTGCTGAGGTTGAGAATTAA 726 0.3719 MASDSGLSELSSLFVSFIRNTNTDMSILLPRSRIFTLSTNNDDPLQQSQNTEDSNHQRIILVNPFTQGMIVIDGASSLEALFRENSTKIGQPPASKESIEAMKRVEIEDGEEDFGECVVCLEEFEVGGVVREMPCNHRFHGDCIEKWLGIHGSCPVCRFVMPVDEKDDGKKIDEEEGGGERRRVGSEVWISFSFNRNMANQAQNQNQNQNQNQNQNQASNGGDSTDSTSNSRDDDGAEVEN 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00753 241 Pfam Ring finger domain 116 158 IPR001841 -
Car02g00753 241 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 80 163 IPR013083 -
Car02g00753 241 MobiDBLite consensus disorder prediction 195 227 - -
Car02g00753 241 SMART ring_2 117 157 IPR001841 -
Car02g00753 241 CDD RING-H2_PA-TM-RING 116 158 - -
Car02g00753 241 PANTHER RING/U-BOX SUPERFAMILY PROTEIN-RELATED 42 198 - -
Car02g00753 241 SUPERFAMILY RING/U-box 102 163 - -
Car02g00753 241 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 42 198 - -
Car02g00753 241 ProSiteProfiles Zinc finger RING-type profile. 117 158 IPR001841 -
Car02g00753 241 MobiDBLite consensus disorder prediction 195 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00753 Car-Chr2 10438917 10439993 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00753 8 195 C3H Transcription Factor Family AT1G26800 50.000 2.95e-54 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00753 - - lang:109356689 228.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00753 02 10438917 10439993 Car02g00753 02 10438917 10439993 ECH