Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00739 ATGGAAGAGAGAAATGATGGTGAAAAACTTGATGAAGTTTTGTTACCAGGGTTTAGGTTTCATCCAACTGATGAAGAGCTTGTTGGGTTTTACCTAAAGAGAAAGATTCAACAAAGGCCTTTATCTATTGAGCTCATCAAACAACTTGATATCTATAAATATGATCCTTGGGATCTTCCAAAGTTTGCTACTACAGGAGAGAAAGAGTGGTATTTCTACTGTCCAAGAGACAGAAAATACAGAAACAGTGCAAGGCCTAATAGGGTAACTGGAGCTGGATTCTGGAAAGCTACAGGAACTGATAGACCTATCTACTCCTCAGAAGGTTCCAAGTGCATTGGTTTGAAGAAATCATTGGTCTTTTACAAAGGCAGAGCTGCTAAAGGTGTCAAAACTGATTGGATGATGCATGAGTTTAGACTACCTTCTCTCATTGATCCACTCTCACCAAACAAGTATATAGACAAAACTATTCCAACTAATGAATCTTGGGCTATATGCAGAATATTTAAGAAAACAAATTCTACAGCTCAAAGAGCTTCATCTCAATCTTGGGTTTCTTCCCTTAATTCTGAAACAAGAACCTCAATGCTAACAAAAAATCAAGAAACCACCCAATTTTGTTCAAACAACATGTCACAAACAAAGAAAACTACCCTACCCAACAATTTCTTCACTAACAATAATAATAATACCCAAAATTTTGATGTTGATGTTGATGTTACTACCCCTTATAAATCCATTATTAATCCACTACTACACAAAGCCTTTGACCACTTACCCATTTCAAATAATGATCTTAACACAAGCTTGATATTTTCATCATCTCCACTTGAAACATCCAACACTAATATTAATTTTTCAAAATCTACAATGGATGTTTCATCAATGCTGTTGAATATGTCATCCTCAATGTTTGTTGGTGATTTTAGCAAAACATGTGATGAGGATATAACTACAAATTTCAATGATGGGTTGCAAGAGCATTTTAGTGACTACTCAACATCATTTCTACAAACCACATTTGGTAATAACCAATATGATAATAATGCATTGGTAAAGATTAATCCTTATTATTATAATAATGTGAATGTGCCTCGTGTTGATGATCAAGATTTCAATATTGGTGATGCATGGAAGTCAAATTTGCTTTGGGATACTTCATTTTGTCCTTGTGATGTTCCCTCTACTTATTATTCAACTACTAAGTGTTATACTTAG 1221 0.3432 MEERNDGEKLDEVLLPGFRFHPTDEELVGFYLKRKIQQRPLSIELIKQLDIYKYDPWDLPKFATTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSEGSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLIDPLSPNKYIDKTIPTNESWAICRIFKKTNSTAQRASSQSWVSSLNSETRTSMLTKNQETTQFCSNNMSQTKKTTLPNNFFTNNNNNTQNFDVDVDVTTPYKSIINPLLHKAFDHLPISNNDLNTSLIFSSSPLETSNTNINFSKSTMDVSSMLLNMSSSMFVGDFSKTCDEDITTNFNDGLQEHFSDYSTSFLQTTFGNNQYDNNALVKINPYYYNNVNVPRVDDQDFNIGDAWKSNLLWDTSFCPCDVPSTYYSTTKCYT 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00739 406 Pfam No apical meristem (NAM) protein 16 141 IPR003441 GO:0003677|GO:0006355
Car02g00739 406 ProSiteProfiles NAC domain profile. 14 172 IPR003441 GO:0003677|GO:0006355
Car02g00739 406 SUPERFAMILY NAC domain 13 172 IPR036093 GO:0003677|GO:0006355
Car02g00739 406 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 404 - -
Car02g00739 406 PANTHER PROTEIN FEZ ISOFORM X1 1 404 - -
Car02g00739 406 Gene3D NAC domain 23 177 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00739 Car-Chr2 10148698 10150430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00739 5 315 NAC Transcription Factor Family AT1G26870 58.537 1.34e-110 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car02g00739 NAM 5.3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00739 - - gmx:100783995 554.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00739 02 10148698 10150430 Car02g00739 02 10148698 10150430 ECH