Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00723 ATGTCTAGCAGAAGATCTCGTTCTAGACAATCTGGTGCTTCCTCTGAGATCACTGATGCTCAAATCACCGATCTCGTCGCTAAATTACTACGACTTATCCCTGAGCTTCGCCCTAGCCGCTCCGGCAAGGTTTCAGCAGCTAAGGTATTGCAAGAGACTTGCAACTACATAAAAAACTTGCATAGAGAAGTTGATGATTTAAGTGACCGATTATCTCAACTTTTGGCTACAACAGATTCCAACAGTGCTCAAGCAGCTATAATTAGGAGCTTACTTATGAAATAA 285 0.4211 MSSRRSRSRQSGASSEITDAQITDLVAKLLRLIPELRPSRSGKVSAAKVLQETCNYIKNLHREVDDLSDRLSQLLATTDSNSAQAAIIRSLLMK 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00723 94 Coils Coil 57 77 - -
Car02g00723 94 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 6 60 IPR011598 GO:0046983
Car02g00723 94 Gene3D - 4 90 IPR036638 GO:0046983
Car02g00723 94 PANTHER TRANSCRIPTION FACTOR PRE 1 93 IPR044293 GO:0006355|GO:0040008|GO:0046983
Car02g00723 94 CDD bHLH_AtPRE_like 17 77 - -
Car02g00723 94 Pfam Helix-loop-helix DNA-binding domain 21 60 IPR011598 GO:0046983
Car02g00723 94 PANTHER TRANSCRIPTION FACTOR PRE6 1 93 - -
Car02g00723 94 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 21 82 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00723 Car-Chr2 9656728 9657895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00723 1 94 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47710 71.579 3.55e-38 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Car02g00723 HLH 1.7e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00723 - - gmx:100804830 148.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00723 02 9656728 9657895 Car02g00723 02 9656728 9657895 ECH
Car02g00723 02 9656728 9657895 Car05g00750 05 42331293 42334258 ECH