Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00720 ATGGCTTTCTTCCAAGCAAATTTCATGCTACAAACCCCtcaccaccatgatgatcatcatcatccaccaccttcactcaACTCAATTCTACCTCAAGATTATCATGGGGGACCATCATTTCTAGGGAAGAGATCTATGTCATTTTCATCAGGAATTGAACTAGGAGAAGAAGTCAATGCTGAGGAAGATTTGTCAGATGATGGATCACAAGCTGGTGAGAAGAAGAGGAGACTTAACATGGAACAAGTGAAGACACTTGAGAAAAGCTTTGAGCTTGGAAATAAGCTTGAGCCAGAGAGGAAAATGCAGCTTGCAAGAGCTCTTAATTTGCAGCCAAGACAGATTGCTATATGGTTTCAAAATAGAAGGGCTAGATGGAAGACAAAACAGTTGGAAAAAGACTATGATGTCCTTAAAAGACAATATGATGCTGTCAAATTAGATAATGATGCACTTCAAACTCAAAACCAAAAACTTCAAGCAGAGCTATTGGCATTGAAAAATAGAGAACCAATTGAATCAATAAACCTTAATATAAAAGAAACAGAAGGATCAAGCAGCAATAGAAGTGAAAACAGTTCAGATATCAAATTAGATATCTCAAGAACACAAGCAAGTGATA 622 0.3441 MAFFQANFMLQTPHHHDDHHHPPPSLNSILPQDYHGGPSFLGKRSMSFSSGIELGEEVNAEEDLSDDGSQAGEKKRRLNMEQVKTLEKSFELGNKLEPERKMQLARALNLQPRQIAIWFQNRRARWKTKQLEKDYDVLKRQYDAVKLDNDALQTQNQKLQAELLALKNREPIESINLNIKETEGSSSNRSENSSDIKLDISRTQASD 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00720 207 SUPERFAMILY Homeodomain-like 65 131 IPR009057 -
Car02g00720 207 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 206 IPR045224 GO:0003700
Car02g00720 207 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-13 1 206 - -
Car02g00720 207 Gene3D - 66 135 - -
Car02g00720 207 ProSiteProfiles 'Homeobox' domain profile. 69 129 IPR001356 GO:0003677
Car02g00720 207 MobiDBLite consensus disorder prediction 177 207 - -
Car02g00720 207 CDD homeodomain 74 130 IPR001356 GO:0003677
Car02g00720 207 ProSitePatterns 'Homeobox' domain signature. 104 127 IPR017970 GO:0000981|GO:0006355
Car02g00720 207 Coils Coil 121 169 - -
Car02g00720 207 Pfam Homeodomain 74 127 IPR001356 GO:0003677
Car02g00720 207 SMART HOX_1 72 133 IPR001356 GO:0003677
Car02g00720 207 Pfam Homeobox associated leucine zipper 129 169 IPR003106 GO:0006355|GO:0043565
Car02g00720 207 MobiDBLite consensus disorder prediction 178 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00720 Car-Chr2 9614361 9615952 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00720 1 207 Homeobox Transcription Factor Family AT1G69780 71.028 1.47e-98 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Car02g00720 Homeodomain 2.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00720 K09338 - gmx:100814080 353.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00720 02 9614361 9615952 Car02g00720 02 9614361 9615952 ECH
Car02g00720 02 9614361 9615952 Car02g00697 02 9215831 9218334 PCT