Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00717 ATGGAAGATATGAAGCAACAGCAGCATCAGAAACAAAAGCATCTTGCTAATGAAGAATCTAAGAAGAAGGAGCGTCACATTGTGACGTGGACTCAAGAGGAGGATGATATATTGAGAGAACAAATTGGAATCCATGGAACTGAAAATTGGGCAATAATTGCTTCTAAATTCAAGGATAAAACTACAAGACAGTGTAGAAGAAGATGGTATACTTATTTGAATTCTGATTTCAAGAAAGGAGGATGGTCACCAGAGGAAGACATGCTCTTATGTGAGGCTCAAAAAATATTTGGCAACAGATGGACAGAAATAGCAAAGGTGGTATCAGGCAGAACGGATAACGCTGTGAAAAACCGTTTCTCGACATTGTGCAAAAAGAGAGCTAAATATGAAGCCTTAGCAAAAGAGAACAACACTTCATACACAAATTCGAATAACAAAAGGATTATTTTCCGAGACGCAGCATCAGAATCTGCAGTAGATTATAAGAAGATGAGGAGGTCTCATATCCCTGATGATGCAGAAAAGATCAACTTTGCAGACAGATCACATAAACTAAATGAAACTCCAATGAATCAGCAGTCAAGAGTGCCGTTAGCAGTTTTAGCTCAAAACTCTCATAACGTCAACAACTTGCCAAATCAGCATCATGTCTGCAATGTGAAGTTTAGTGGTTATGCTCAAAACAAAATTCAAGGAACATTTCTTAAAAAGGATGACCCAAAGATAAGCGCGTTGATGCAACAAGCCGAGCTACTAACTTCACTAGCTCTAAAACTTGATGCAGAGAATATGGACCAAAGTCTTGAAAATGCATGGAAGGTTCTTCAAGAGTTTCTGAACCGAAACAAAGAATCGGATATTCCTGGATATAAGATTCCAGATTTACAGCTTGTAGATCTTAAAGATTTATTGGAAGACTTAAAGAATAGTAGTGAGGAAATCCAGCCATGTTGGAGGTATATGGAATTATATGAAGACTCTCCAGGCAGTTCTGAACACAGTACAGAGTCAGGTAATCTGCCTCATTCTTCTGATGAGAATTTGGAACACTCACTGCATCAAGATTGTGGAACTGAATTGAAATCTATACAAATTGGAGACCAAAAGGAAGTTGGAGGATGTGATCAAGTGGTTCTTTCTAGTGCATCCTTGGATCAAGATATATTCTCATCTTGTGAGGAACAGATAAACATTGATGGTATTGTTTCTTCCTTATCAAGTACAGAGTTCAGTTCCCCTCTTCAAGTTACCCCTCTGTTTAGATCCTTAGCTGCAGGAATTCCTAGTCCACAATTTTCAGAAAGTGAAAGGAACTTCCTTATGAAAACACTTGGAATGGAGTCTCCATCCCTCAACCCAATCGCCAATCCCTCGCAACCGCCGCTCTGCAAAAGAGCCCTCTTACAAAGTTAA 1416 0.3898 MEDMKQQQHQKQKHLANEESKKKERHIVTWTQEEDDILREQIGIHGTENWAIIASKFKDKTTRQCRRRWYTYLNSDFKKGGWSPEEDMLLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFSTLCKKRAKYEALAKENNTSYTNSNNKRIIFRDAASESAVDYKKMRRSHIPDDAEKINFADRSHKLNETPMNQQSRVPLAVLAQNSHNVNNLPNQHHVCNVKFSGYAQNKIQGTFLKKDDPKISALMQQAELLTSLALKLDAENMDQSLENAWKVLQEFLNRNKESDIPGYKIPDLQLVDLKDLLEDLKNSSEEIQPCWRYMELYEDSPGSSEHSTESGNLPHSSDENLEHSLHQDCGTELKSIQIGDQKEVGGCDQVVLSSASLDQDIFSSCEEQINIDGIVSSLSSTEFSSPLQVTPLFRSLAAGIPSPQFSESERNFLMKTLGMESPSLNPIANPSQPPLCKRALLQS 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00717 471 MobiDBLite consensus disorder prediction 1 25 - -
Car02g00717 471 PANTHER MYB PROTEIN-RELATED 11 469 - -
Car02g00717 471 PANTHER TRANSCRIPTION FACTOR MYB88 11 469 - -
Car02g00717 471 Coils Coil 1 21 - -
Car02g00717 471 MobiDBLite consensus disorder prediction 326 350 - -
Car02g00717 471 Pfam Myb-like DNA-binding domain 30 90 - -
Car02g00717 471 CDD SANT 29 73 IPR001005 -
Car02g00717 471 ProSiteProfiles Myb-like domain profile. 74 124 IPR001005 -
Car02g00717 471 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 78 128 IPR017930 -
Car02g00717 471 MobiDBLite consensus disorder prediction 329 346 - -
Car02g00717 471 SUPERFAMILY Homeodomain-like 26 120 IPR009057 -
Car02g00717 471 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 22 77 IPR017930 -
Car02g00717 471 Gene3D - 17 78 - -
Car02g00717 471 CDD SANT 82 123 IPR001005 -
Car02g00717 471 Gene3D - 80 152 - -
Car02g00717 471 SMART sant 78 126 IPR001005 -
Car02g00717 471 SMART sant 26 75 IPR001005 -
Car02g00717 471 ProSiteProfiles Myb-like domain profile. 30 73 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00717 Car-Chr2 9559088 9565531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00717 15 321 MYB Transcription Factor Family AT2G02820 63.407 2.31e-138 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Car02g00717 Myb_DNA-bind_6 8e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00717 K09422 - gmx:100807667 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00717 02 9559088 9565531 Car02g00717 02 9559088 9565531 ECH
Car07g02094 07 25903639 25910702 Car02g00717 02 9559088 9565531 PCT