Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00715 ATGGTTGTTGCTGTTAAAAGGCTTAAGCCTGAAGGTTTTCAAGGTCACAAGGAGTGGTTGACTGAGGTTAACTACCTTGGACAACTTCACCATCCTAATCTGGTCAAATTAATTGGTTACTGCTTGGAAGGAGACAACAGGCTATTGGTATATGAGTTTATGCCCAAAGGGAGCTTAGAGAACCATCTTTTTAGAAGAGGACCACAACCACTGTCTTGGTCAATAAGAATGAAAGTGGCAATTGGTGCTGCAAGAGGACTCTCTTTTCTTCACAATGCCAAATCACAAGTCATTTACCGCGATTTCAAAGCTTCTAACATCCTTTTAGACGCGGAGTTTAATTCAAAACTCTCTGATTTTGGCTTGGCAAAGGCGGGTCCTACCGGTGATAGAACTCATGTTTCTACTCAAGTAATGGGTACTCAAGGATATGCAGCACCTGAATATGTTGCAACTGGTCGGCTGACAGCCAAAAGTGATGTATACAGCTTTGGAGTTGTTTTGCTTGAACTTTTGTCCGGAAGACGCGCGGTCGATAAAACAATAGCCGGTGTAGACCAAAATCTAGTAGATTGGGCAAAACCATATTTAGGCGATAAACGAAGACTATTCCGAATCATGGATTCGAAATTAGAAGGCCAATATCCACAAAAAGGAGCATTCATGGCAGCTACACTTGCTCTACAATGCCTTAACAGAGAAGCCAAGGCAAGACCTCCAATGATAGAGGTTTTAGCAACACTAGAACATATAGAAGCACCTAAACACGCGAGCCGAAATTCTCTATCGGAACATCAACGAGTCCATGCTCCGATAAGAAAGTCTCCCGCGCGAAACCGAACACCTTTGAATAGTACTCCTACTGCATCCCCATTGCCATCTGTTCGACAATCGCCTCGTGCGCGTTAG 909 0.4367 MVVAVKRLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGDNRLLVYEFMPKGSLENHLFRRGPQPLSWSIRMKVAIGAARGLSFLHNAKSQVIYRDFKASNILLDAEFNSKLSDFGLAKAGPTGDRTHVSTQVMGTQGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKTIAGVDQNLVDWAKPYLGDKRRLFRIMDSKLEGQYPQKGAFMAATLALQCLNREAKARPPMIEVLATLEHIEAPKHASRNSLSEHQRVHAPIRKSPARNRTPLNSTPTASPLPSVRQSPRAR 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00715 302 PANTHER OS01G0588500 PROTEIN-RELATED 1 300 - -
Car02g00715 302 MobiDBLite consensus disorder prediction 256 271 - -
Car02g00715 302 SUPERFAMILY Protein kinase-like (PK-like) 2 248 IPR011009 -
Car02g00715 302 PIRSF ILK 1 266 - -
Car02g00715 302 PANTHER PROTEIN KINASE 2B, CHLOROPLASTIC 1 300 - -
Car02g00715 302 ProSiteProfiles Protein kinase domain profile. 1 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00715 302 Gene3D Phosphorylase Kinase; domain 1 1 54 - -
Car02g00715 302 Pfam Protein tyrosine and serine/threonine kinase 2 247 IPR001245 GO:0004672|GO:0006468
Car02g00715 302 Gene3D Transferase(Phosphotransferase) domain 1 55 274 - -
Car02g00715 302 MobiDBLite consensus disorder prediction 278 302 - -
Car02g00715 302 CDD STKc_IRAK 2 251 - -
Car02g00715 302 MobiDBLite consensus disorder prediction 256 302 - -
Car02g00715 302 ProSitePatterns Serine/Threonine protein kinases active-site signature. 97 109 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00715 Car-Chr2 9532205 9535228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00715 1 248 Glycoside Hydrolase AT3G07070 56.574 1.85e-96 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Car02g00715 PK_Tyr_Ser-Thr 6.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00715 - - gmx:100809778 558.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00715 02 9532205 9535228 Car02g00715 02 9532205 9535228 ECH