Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00713 ATGGGGAAAGGAAGAAGTCCTGGGAAGTGGATCAAGAGCTTACTCTCGGGGAAGAAATCGTCATCAAAGACTAGTTCATCGAAGAAGAATGATATTTTTAAATCTTCAAGTAACAAAGATGCGCTGGGGTCTTCTGAGTTAACTGTGTCTAATCCAATTCCAACTGTGGATTCTTTGCTGATATCACCACCGATATCTGGCTCTAATGCTACTAAAGAAGTGCTTTTAGAAAAGGAAGTTGTTAGTAGCTTACCACATGAGAGGGATATTCTCTCCAATAGAAATGAAGAGGCTCGTGCACCCGAAGTTGCTAATTTTGCATCTAAAGATGAGCTTGAGACACTCAAGCTTACAGAAGCAGCTATTAAACTTCAAGCTGCTTGTAGAGGCTATCAGGCTCGTCGGGAATTTCAAACACTCAAAGGTATCACACTGCTGCAAGCTCTTATTCGTGGTCACTTGATTAGAAGACAAGCTGTTTCTGCTTTACATTGTGTGAAGGGAATTGTTAAATTCCAAGCATTGGCTCGTGGTTACAATGTTAGGCGTTCTGATGTTGGGGTTTCTGTCCTGAATATTCGTAAGGATTCTCAATTTTCAAAACCTATTGGCGTAGTTACATCTACACAGGCAGAGAAGCTGTCAGGAAATGTCTTTGTTCACAAGCTGCTGGTTTCATCCTCCCATGCTTTTCCTCTAACTCTCAATAGTGATCTTGGAGAACCTTACTTGGCTTGGAACTGGCTTGATCGTTGGACAAGGTTACGCTTTTGGGCACCTCTTTCTAAATCGGAGAAGAAACTTGACTCGGTGTCTGATGAAAAAAATATCAGTTGTCAAACAGTTGAAAAGGGACAAGTTAAAAGGAATATCCGGAAATCTCCTGCTGTGAAGCCTGATGATGGCTCAAGTTCAGGTTCTAACAAACATAAACAACGTCCAAAAAAAGATTCAAATAACTCATTGCTTTCAACACAGGAACATCCACAGAAAGAAATTGAGAAAAGTAGTCTAAAAAAAACTCGCATGCAGAATGTTTCAGACAGATCTGAGATTGTTAATGAGAAAAGAAAACACAGCTCTAAGACAACTTCAGATCATACTGTTACCGATGTTTCAGAGAAGGGGCCAAATTCCTCTTCAGAGAAAAAAATGAAAGATATTACAGTGCCAAAGTCAGAAGAGTCGTATCCTGAGAAAGATCTTGAAAAGAAAGCACAAGAAGAGAATAACGATAAGCCACGTAATGATTCTACTGCTGTTCTACAGACTAGAGTGAAGAATGTAGGAGATGAAACATTAGGAGTTAGTGAAGAGTTAAACGGCGGTGACAAAATTATCAGCAACAATTACCAAAGAAGAGCTTCACTACCTGCTAATTTTAATGATCAAGAGAATGAGTTACATAATACTCCAAGAGTGCCGAGTTATATGGCTCCTACTGAATCTGCAAAAGCTAGGCTAAGGGGACAAGGCTCCCCTAGATTTGCTACTGATATCGTAGACAAAAACAGTTTAACCAGGAGGCATTCACTTTCATCTTCACTTAACAGCAGGTCGGGTTCATTTTCCCCAAGAGCAGAAAAGCTGATTACTTTGAGCAGTAGAGGAGTTGCAAGGACTGATAAATCTCTGTCATCGTCAAGGGATGGAACTGATAAGCTGGTCCAACCTCAGTGGCGAAGGTGA 1689 0.4056 MGKGRSPGKWIKSLLSGKKSSSKTSSSKKNDIFKSSSNKDALGSSELTVSNPIPTVDSLLISPPISGSNATKEVLLEKEVVSSLPHERDILSNRNEEARAPEVANFASKDELETLKLTEAAIKLQAACRGYQARREFQTLKGITLLQALIRGHLIRRQAVSALHCVKGIVKFQALARGYNVRRSDVGVSVLNIRKDSQFSKPIGVVTSTQAEKLSGNVFVHKLLVSSSHAFPLTLNSDLGEPYLAWNWLDRWTRLRFWAPLSKSEKKLDSVSDEKNISCQTVEKGQVKRNIRKSPAVKPDDGSSSGSNKHKQRPKKDSNNSLLSTQEHPQKEIEKSSLKKTRMQNVSDRSEIVNEKRKHSSKTTSDHTVTDVSEKGPNSSSEKKMKDITVPKSEESYPEKDLEKKAQEENNDKPRNDSTAVLQTRVKNVGDETLGVSEELNGGDKIISNNYQRRASLPANFNDQENELHNTPRVPSYMAPTESAKARLRGQGSPRFATDIVDKNSLTRRHSLSSSLNSRSGSFSPRAEKLITLSSRGVARTDKSLSSSRDGTDKLVQPQWRR 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00713 562 Pfam IQ calmodulin-binding motif 167 183 IPR000048 GO:0005515
Car02g00713 562 Pfam IQ calmodulin-binding motif 141 158 IPR000048 GO:0005515
Car02g00713 562 Pfam IQ calmodulin-binding motif 118 138 IPR000048 GO:0005515
Car02g00713 562 Gene3D - 116 160 - -
Car02g00713 562 MobiDBLite consensus disorder prediction 1 47 - -
Car02g00713 562 Pfam Protein of unknown function (DUF4005) 464 534 IPR025064 -
Car02g00713 562 MobiDBLite consensus disorder prediction 280 421 - -
Car02g00713 562 PANTHER IQ-DOMAIN 5-RELATED 1 559 - -
Car02g00713 562 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 559 - -
Car02g00713 562 SMART iq_5 139 160 IPR000048 GO:0005515
Car02g00713 562 SMART iq_5 116 138 IPR000048 GO:0005515
Car02g00713 562 MobiDBLite consensus disorder prediction 510 529 - -
Car02g00713 562 ProSiteProfiles IQ motif profile. 117 141 IPR000048 GO:0005515
Car02g00713 562 MobiDBLite consensus disorder prediction 377 415 - -
Car02g00713 562 ProSiteProfiles IQ motif profile. 141 168 IPR000048 GO:0005515
Car02g00713 562 MobiDBLite consensus disorder prediction 328 369 - -
Car02g00713 562 MobiDBLite consensus disorder prediction 537 554 - -
Car02g00713 562 MobiDBLite consensus disorder prediction 510 562 - -
Car02g00713 562 MobiDBLite consensus disorder prediction 15 47 - -
Car02g00713 562 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 114 159 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00713 Car-Chr2 9428294 9435075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00713 4 562 IQD Protein Family AT1G14380 34.206 1.86e-74 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00713 - - aprc:113869184 705.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00713 02 9428294 9435075 Car02g00713 02 9428294 9435075 ECH
Car02g00713 02 9428294 9435075 Car07g00964 07 8490820 8495984 ECH
Car02g00713 02 9428294 9435075 Car07g00964 07 8490820 8495984 PCT