Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00702 ATGGGGTTGTTGGGTGGTGGTAATGGTGAAGTAGTGGAGTCTTGGGATGTGTGTAAATCAaagggggtgaagaagaggaagaagaataagaaaggtaaagagaatgagGGTGTTGTTAAAGAGGAAGAAACTGGGTGTTGGGTTAGGTTATGGTTAATTGGTAGCTGCATTTCTTCAAGATCCAAAGTTGATAACTCGGTCAGCGGTACAAGTACTCATTATGCTGATAGTAAATCAACTAATGATACAAGTAGAGGCCAACCTACCGCTACGGTAATCTCTTCTACAACCACTAGTAACACAGAAAGCAATTCGTCCACTTCTAAACTTGAAGAGGAGCTTAAAATTGCGTCCAGGCTGCGAAAATTCTCTTTCAATGATCTTAAGTTGGCAACAAGAAATTTCCGGCCTGAAAGTTTTCTCGGTGAAGGTGGGTTCGGTTGTGTTTTCAAAGGTTGGATCGAAGAAAATGGAACGGCTCCAGTGAAACCGGGCACAGGGCTTACTGTCGCTGTGAAAACCCTTAACCATGATGGACTTCAGGGTCATAAAGAATGGCTGgcagaggtaaattttcttggtgatctagttcatcaaaaccttgttaaactcataggttactgcattgaagatgatcaaaggctgctagtgtatgagttcatgccTCGTGGAAGCCTGGAAAATCACTTATTTAGGAGATCCCTGCCTCTTCCATGGTCCATTAGGATGAAAATTGCACTAGGAGCTGCGAAGGGTCTTGCCTTTCTTCATGAAGAAGCTGAACGACCAGTAATATACAGGGATTTTAAAACGTCGAATATACTACTAGATGCGGACTACAATGCCAAGCTCTCGGATTTTGGTCTCGCCAAAGATGGTCCTGAAGGTGATAAAACCCATGTGTCTACTCGAGTGATGGGAACCTATGGTTACGCAGCACCAGAATATGTCATGACAGGTCATCTTACATCAAAAAGTGACGTGTACAGTTTCGGAGTCGTACTACTTGAGATGTTGTCCGGCAGAAGATCTATGGACAAACACCGACCCAACGGCGAGCATAATCTTGTCGAATGGGCTCGACCGCATCTAGGAGAGCGAAGAAGGTTCTACCGACTAATAGACCCTCGTCTTGAAGGCCACTTTTCCATAAAAGGAGCTCAGAAAGCCGCTCAACTCGCAGCTCACTGTCTCAGTAGAGATCCAAAAGCCAGACCCCTAATGAGTGAAGTTGTGGAAGCTTTAAAGCCTCTACCAAACCTTAAGGACATGGCAAGCTCTTCATACTATTTCCAAACAATGCAAGCCGAACGGTTCGGAGCGAGTCCAAACTCTAGAAGTGTACATGCACAAGGACCGTTCGCCCGGAACGGTCAACAGCGAAGGACCCTTTCGATACCGAATGGCACTCATGTGTCTCCTTATCACCATAAGTTTCCGCAACAATCGCCTAAACCTAATGGCAAAGCGTAG 1473 0.41 MGLLGGGNGEVVESWDVCKSKGVKKRKKNKKGKENEGVVKEEETGCWVRLWLIGSCISSRSKVDNSVSGTSTHYADSKSTNDTSRGQPTATVISSTTTSNTESNSSTSKLEEELKIASRLRKFSFNDLKLATRNFRPESFLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHQNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLSGRRSMDKHRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQAERFGASPNSRSVHAQGPFARNGQQRRTLSIPNGTHVSPYHHKFPQQSPKPNGKA 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00702 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Car02g00702 490 Pfam Protein tyrosine and serine/threonine kinase 140 415 IPR001245 GO:0004672|GO:0006468
Car02g00702 490 ProSitePatterns Protein kinases ATP-binding region signature. 141 173 IPR017441 GO:0005524
Car02g00702 490 MobiDBLite consensus disorder prediction 61 108 - -
Car02g00702 490 SUPERFAMILY Protein kinase-like (PK-like) 121 437 IPR011009 -
Car02g00702 490 MobiDBLite consensus disorder prediction 443 490 - -
Car02g00702 490 MobiDBLite consensus disorder prediction 443 470 - -
Car02g00702 490 PANTHER KINASE APK1B, CHLOROPLAST, PUTATIVE-RELATED 66 480 - -
Car02g00702 490 CDD STKc_IRAK 141 418 - -
Car02g00702 490 Gene3D Transferase(Phosphotransferase) domain 1 221 436 - -
Car02g00702 490 Gene3D Phosphorylase Kinase; domain 1 109 220 - -
Car02g00702 490 MobiDBLite consensus disorder prediction 61 107 - -
Car02g00702 490 ProSiteProfiles Protein kinase domain profile. 135 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00702 490 PANTHER OS01G0588500 PROTEIN-RELATED 66 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00702 Car-Chr2 9340487 9344134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00702 98 415 Glycoside Hydrolase AT3G07070 55.763 4.54e-117 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Car02g00702 PK_Tyr_Ser-Thr 4.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00702 - - gmx:100787151 838.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00702 02 9340487 9344134 Car02g00702 02 9340487 9344134 ECH